Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1911 ATGATGGGTTGTGGCGGTGCATTCTCAGTGTGGCTGCCAGTGTTTGTGTCTTGTTTTACAGCAATAGCATTGGCTGGGACTGGGTGCGATAAGGCACCGGTGGTGTTCGTGTTCGGCGATTCGAACTCGGACACGGGTGGACTCGCTTCCGGTCTGGGTTTCCCTATCAATCTTCCCAATGGCCGCAATTTCTTTCACAGATCCACTGGCCGCTTGTCCGATGGACGCCTCGTCATCGACCTACTCTGCCAAAGTTTGAATGCAAGTTTGTTGGTACCATATTTGGACGCCTTGTCTGGAACCTCATTCACAAATGGAGCAAACTTTGCAGTGGTGGGGTCCTCTACTCTCCCAAAATATGTTCCTTTCTCCCTCAATATACAGGTCATGCAGTTCCGGCGTTTCAAAGCTCGTTCCCTTGAACTTGTTACCACAGGTACAAGAAATTTGATCAATGATGAAGGCTTCCACGGTGCACTCTACTTGATTGATATTGGGCAAAACGACCTTGCTGATTCATTTGCCAAAAATCTGTCATATGTGCAAGTCATCAAGAAGATCCCAGTAGTTATAACTGAAATTGAGAATGCTGTTAAGAGTTTATATAATGAAGGTGCCAGGAAATTTTGGGTTCACAATACTGGGCCGTTGGGCTGTCTTCCAAAAGTACTTGCACTGGCTCAGAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGTTATAACTCTGCAGCAAGATTGTTTAATGAAGCCCTGCTTCATTCAAGTCAGAAACTAAGATCTGAACTTAAGGATGCTACTTTAGTCTATGTTGATATTTATGCCATTAAGTATGATCTCATCACAAATGCCGCGAAATATGGTTTCTCAAATCCGTTGATGGTATGTTGCGGTTATGGAGGACCACCTTACAATTTTGATGTAAGGGTGACATGTGGTCAACCTGGTTATCAGGTTTGTGATGAAGGGGCTCGGTATGTGAGCTGGGATGGAATTCATCAAACTGAGGCTGCAAATACATTGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCACGGATTCCTTTTGATTTCTTCTGCCACCACTGA 1095 0.4438 MMGCGGAFSVWLPVFVSCFTAIALAGTGCDKAPVVFVFGDSNSDTGGLASGLGFPINLPNGRNFFHRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRRFKARSLELVTTGTRNLINDEGFHGALYLIDIGQNDLADSFAKNLSYVQVIKKIPVVITEIENAVKSLYNEGARKFWVHNTGPLGCLPKVLALAQKKDLDSLGCLSSYNSAARLFNEALLHSSQKLRSELKDATLVYVDIYAIKYDLITNAAKYGFSNPLMVCCGYGGPPYNFDVRVTCGQPGYQVCDEGARYVSWDGIHQTEAANTLIASKILSMAYSTPRIPFDFFCHH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1911 364 Pfam GDSL-like Lipase/Acylhydrolase 35 346 IPR001087 GO:0016788
Gso19g1911 364 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 15 363 - -
Gso19g1911 364 Gene3D SGNH hydrolase 30 352 IPR036514 -
Gso19g1911 364 PANTHER OS01G0329900 PROTEIN 15 363 - -
Gso19g1911 364 SUPERFAMILY SGNH hydrolase 35 348 - -
Gso19g1911 364 CDD SGNH_plant_lipase_like 33 348 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1911 Gso-Chr19 47828996 47833071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1911 32 353 Acyl Lipid Metabolism Gene Families AT4G10950 27.405 1.26e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1911 - - gmx:100797617 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1911 19 47828996 47833071 Gso19g1911 19 47828996 47833071 ECH
Gso19g1911 19 47828996 47833071 Gso3g1949 3 45044547 45064412 GST