Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1946 ATGTCTGTGTCTTTCTCTTCAACCTCGGTTTCGTTCTCGGAATCCTCATTTGCATTCCAAAGACCTGCTCCAGCACATCTTTGCTCAAATTCACTCACCGTTGCATCGAACAACTTTCATTCAGCAACAGGTGGTGGTCGTCTTGTGCTGAATGTTGGAGGCACCTGCTTGTGTCGAAAGTTTCGTGGTTTGAAACTGTGGCTACTTGAGAGACTCAGCTTCCAATTCCAGCCACCAAAGCAACCTAAGAATAGAAACCATCACTTCAGGAATAATTTGGAAAATGAAAAGGGATCGGTTTCTGATTCATCTTCAAATCTTCGTGTTCCTGATGATAAGGTCACTCCGGTGGAGTCTCTATCGTTGCTGCAGACAGGTTTGTCTGGTACTCCCGTGGATGTTGGCAGAAAGCCCTCACTTTGTATTGCTGTCATAGGAGCCACCGGTGAGCTGGCAAAGAGGAAGATTTTCCCTGCTTTGTTTGCCCTCTACTACAGTGGCTTTCTTCCCGAGAATGTAGGCATTTTTGGTTATTCAAGGAAGGATATAACTGATGAAGACCTGCGATCTATTATAGCTTCAACATTAACATGCCGAGTTGATCATCAAGAAAATTGTGACAACAAATTAGATGCTTTCCTTAGTAAAACATATTACATTAATGGAGGCTATGACAATAAATATGGGATGTCCATGCTGAATTCTCGAATGGAGCAAATTGAGGGAGGATCCAAAACCAACAGGATATTCTACCTTTCTGTGCCACAAGAAGCACTTTTGGATGTTGCTTCATGCCTTGCAAGCAGTGCTCAGACCCAGAATGGATGGAATCGCATAATATTTGAGAAGCCATTTGGCTTTGATGCACGTTCTTCTGATAGGCTGACACAATATATTCTTTCAAACTTTCAGGAAAAGCAAATATTTAGGATTGATCATCTACTAGGAAGGAATCTCATTGAAAATCTTACAGTTTTAAGGTTTTCAAATCTAGTTTTTGAGCCACTTTGGAGTCGTACTTACATAGATAATGTACAGGTCATTTTATCAGAGGACTTGGCTGTGCATCCAGGAAGATATTTCAGTGGCTACGGAATTATCCGTGATATTGTTCACTGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAATAAGCCTTGATGGAGAAGATATTAGAAATGAAAAGCTCAAGGTTTTGAGGTTAATTCGCAAATTGGAGCCGAAGGATGTCATTCTTGGCCAATATAAAGCAAGTGGTGGAGCCAAAGTTGATGCATGCGTAAATGGTCTGACACCTACTTATTTTGCTGCTGCACTATACATTGACAATGCACGATGGGATGGTGTGCCATTTCTGATTAAAACAGGCTTGGGGCTCATCAAACACCAAATGGAGATTCGGATTCAATTTCGCAATGTTCCGGGGAATGTATACCATGAGTGCATCGGGCATAACAGGGACCGTGCCATAAATGAACTCATTCTTCGGGATGTTCCTGATGAAGCTATTTTGGTGAGAGTGAACAATAAGGTTCCAGGACTAGGCCTGCAACTGGACTCTTCAGAATTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTGCCGGATTCATACGAGCATCTTCTTCTGGATGTCATTGATGGAGACAACCATTTGTTTATGAGAAGTGATGAGTTGGCAGCAGCGTGGACCATTCTAACTCCAATTCTGAATGAGATAGACAAGAACAATATGTCAGTGGAGCTTTATGAGATGGGGGGTCGCGGTCCTGTTGGGGCATACTACCTCTGGGCGAAACATGGTGTCCGTTGGGTGGAGGATTAA 1839 0.4269 MSVSFSSTSVSFSESSFAFQRPAPAHLCSNSLTVASNNFHSATGGGRLVLNVGGTCLCRKFRGLKLWLLERLSFQFQPPKQPKNRNHHFRNNLENEKGSVSDSSSNLRVPDDKVTPVESLSLLQTGLSGTPVDVGRKPSLCIAVIGATGELAKRKIFPALFALYYSGFLPENVGIFGYSRKDITDEDLRSIIASTLTCRVDHQENCDNKLDAFLSKTYYINGGYDNKYGMSMLNSRMEQIEGGSKTNRIFYLSVPQEALLDVASCLASSAQTQNGWNRIIFEKPFGFDARSSDRLTQYILSNFQEKQIFRIDHLLGRNLIENLTVLRFSNLVFEPLWSRTYIDNVQVILSEDLAVHPGRYFSGYGIIRDIVHCHVLQTIALLAMEPPISLDGEDIRNEKLKVLRLIRKLEPKDVILGQYKASGGAKVDACVNGLTPTYFAAALYIDNARWDGVPFLIKTGLGLIKHQMEIRIQFRNVPGNVYHECIGHNRDRAINELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWTILTPILNEIDKNNMSVELYEMGGRGPVGAYYLWAKHGVRWVED* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1946 612 Gene3D - 137 310 - -
Gso3g1946 612 PRINTS Glucose-6-phosphate dehydrogenase signature 278 291 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 PRINTS Glucose-6-phosphate dehydrogenase signature 302 330 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 PRINTS Glucose-6-phosphate dehydrogenase signature 353 370 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 PRINTS Glucose-6-phosphate dehydrogenase signature 371 387 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 PRINTS Glucose-6-phosphate dehydrogenase signature 449 475 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 115 612 - -
Gso3g1946 612 MobiDBLite consensus disorder prediction 79 109 - -
Gso3g1946 612 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 144 322 IPR022674 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 139 611 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 Gene3D Dihydrodipicolinate Reductase; domain 2 311 611 - -
Gso3g1946 612 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 115 612 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 137 325 IPR036291 -
Gso3g1946 612 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 140 610 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso3g1946 612 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 325 609 IPR022675 GO:0004345|GO:0006006|GO:0050661
Gso3g1946 612 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 312 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1946 Gso-Chr3 45019569 45025898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1946 K00036 - gmx:100811075 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1909 19 47814693 47820339 Gso3g1946 3 45019569 45025898 GST