Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1909 ATGTCTGTGTCTTTCTCTTCAACCTCATTCGCATTCCAAAGACCAGCACATCTTTGCTCAAATTCACTCACCGTTGCATCCAACAACTTTGATTCGGTACCAGGTGGACTCGGTCGTCTTGTGCTGAATGTTAGAAGCACCAGCTTGTGTCGAAGGTTTCGTGGCTTGAAACTGTGGGTACTTGAGAGACTCAACTTCCAATTCCAGCCACCAAAGCAACCTAAGAATAGAAATCATCACTTCAAAAATAATTTGGAAAATGAAAAGGGATCGGTTTCTGATTCATCCTCAATTCTTCATGTTCCTGATGATAAGGTCACTCCCATGGAGTCTCCATCTTTGCTGCAGACAGGTTTGTCTGGTGCTCCCATGGATGTTAGCAGAAAGCCCTCTCTTTGTATTGCAGTCATAGGGGCCACTGGCGAGCTGGCAAAGAGGAAGATTTTCCCTGCTTTATTTGCCCTCTACTACAGTGGCTTCCTTCCCGAGAATGTAGGCATTTTTGGTTATTCAAGGAAGGATATAACTGATGAAGACCTGCAATCTATTATAGCTTCAACGTTAACATGCCGAGTTGATCATCAAGAAAACTGTGACGACAAATTAAATGCTTTCCTTAGTAGAACATATTACATTAATGGAGGCTATGACAATAAATATGGGATGTCCATGCTGAATGCTCGAATGGAGCAAATTGAGGGAGGATCCAAAACCAACAGGATATTCTACCTTTCTGTGCCACAAGAAGCACTTTTGGATGTTGCGTCATGTCTTGCAAGCAGTGCTCAGACCCAGAAGGGATGGAATCGCATAATATTTGAGAAGCCATTTGGCTTTGATGCACTTTCTTCCCATAGGCTGACACAATATCTTCTTTCAAACTTTCAGGAAAAGCAAATATATAGAATTGATCATCTACTAGGAAGGAATCTCATTGAAAATCTTACAGTTTTAAGGTTTTCAAATCTAGTTTTTGAGCCACTTTGGAGTCGTACTTATATAGATAATGTACAGGTCATTTTATCAGAGGACTTGGCTGTGCATCCTGGAAGATATTTCAGTGGCTATGGAATTATCCGTGATATTGTACACAGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAATAAGCCTTGATGGAGAAGATATTCGAAATGAAAAGCTTAAGGTTTTGAGGTCAATTCGCAAATTGGAGCCAAAGGATGTCATTCTCGGCCAATATAAAACAAGTGGTGGAGCCAAAGTTGATGCGTGCCTAAATGGTCTGACACCTACTTATTTTGCTGCTGCACTATACATTGACAATGCACGATGGGATGGCGTGCCATTTCTGATTAAAACAGGCTTGGGGCTCATCAAACACCAAATGGAGATACGGATTCAATTTCGCAATGTACCGGGGAATGTGTACCACGAGTGCATCGGGCATAATATGGACCGCGCTGTAAATGAGCTCATTCTTCGCGATGTTCCTGATGAAGCTATTTTAGTGAGAGTCAACAATAAGGTTCCAGGACTAGGCCTACAACTGGACTCTTCAGAATTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTGCCGGATTCATACGAGCATCTTCTTCTCGATGTCATTGATGGGGACAGCCATTTGTTTATGAGAAGTGATGAGTTGGCAGCAGCGTGGAATATTCTAACTCCAATTCTGAATGAGATAGACAAAGACAATATGTCAGTGGAGCTTTATGAGATGGGGGGTCGCGGTCCTGTTGGGGCATACTACCTCTGGGCGAAACATGGTGTCCGTTGGGTGGAGGATTAG 1815 0.4264 MSVSFSSTSFAFQRPAHLCSNSLTVASNNFDSVPGGLGRLVLNVRSTSLCRRFRGLKLWVLERLNFQFQPPKQPKNRNHHFKNNLENEKGSVSDSSSILHVPDDKVTPMESPSLLQTGLSGAPMDVSRKPSLCIAVIGATGELAKRKIFPALFALYYSGFLPENVGIFGYSRKDITDEDLQSIIASTLTCRVDHQENCDDKLNAFLSRTYYINGGYDNKYGMSMLNARMEQIEGGSKTNRIFYLSVPQEALLDVASCLASSAQTQKGWNRIIFEKPFGFDALSSHRLTQYLLSNFQEKQIYRIDHLLGRNLIENLTVLRFSNLVFEPLWSRTYIDNVQVILSEDLAVHPGRYFSGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKLKVLRSIRKLEPKDVILGQYKTSGGAKVDACLNGLTPTYFAAALYIDNARWDGVPFLIKTGLGLIKHQMEIRIQFRNVPGNVYHECIGHNMDRAVNELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDSHLFMRSDELAAAWNILTPILNEIDKDNMSVELYEMGGRGPVGAYYLWAKHGVRWVED* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1909 604 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 131 603 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 86 604 - -
Gso19g1909 604 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 304 602 - -
Gso19g1909 604 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 317 IPR036291 -
Gso19g1909 604 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 317 601 IPR022675 GO:0004345|GO:0006006|GO:0050661
Gso19g1909 604 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 86 604 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 MobiDBLite consensus disorder prediction 71 97 - -
Gso19g1909 604 Gene3D - 128 302 - -
Gso19g1909 604 Gene3D Dihydrodipicolinate Reductase; domain 2 303 603 - -
Gso19g1909 604 PRINTS Glucose-6-phosphate dehydrogenase signature 270 283 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 PRINTS Glucose-6-phosphate dehydrogenase signature 294 322 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 PRINTS Glucose-6-phosphate dehydrogenase signature 345 362 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 PRINTS Glucose-6-phosphate dehydrogenase signature 363 379 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 PRINTS Glucose-6-phosphate dehydrogenase signature 441 467 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 136 314 IPR022674 GO:0006006|GO:0016614|GO:0050661
Gso19g1909 604 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 132 602 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1909 Gso-Chr19 47814693 47820339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1909 K00036 - gmx:100796541 1217.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1909 19 47814693 47820339 Gso19g1909 19 47814693 47820339 ECH
Gso19g1909 19 47814693 47820339 Gso3g1946 3 45019569 45025898 GST