Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1928 ATGGCTGACCATGATGCAAAAGAAGAACAAAGGCCCCTCAACCAATGGAGAAGAAGCAAAGGGGGATTCATGGCTTCCATGTTCATTTTTGTCTTGTCAGCATTGGACAACATGGGCTTTGTGGCAAACATGGTAAGCATAGTCCTATACTTTTATGGAGTGATGCACTTTGATCTAGCCAGTTCAGCCAACACACTCACAAACTTCATGGGCTCAACCTACTTGCTTTCCCTTGTTGGTGGCTTCATCTCAGATACTTACTTGAACAGATTCACCACATGCTTGCTTTTCGGATCACTCGAGGTTCTGGCTTTGGCAATGCTCACAGTCCAAGCTGCTTCAAAACATTTACACCCTGAAGCATGTGGCAAGTCAAGCTGTGTGAAAGGTGGCATAGCAGTGATGTTCTACACATCACTGTGCTTGTTGGCATTGGGAATGGGAGGGGTGAGAGGATCCATGACTGCATTTGGAGCTGACCAATTTGATGAGAAGGATCCAACTGAGGCAAAAGCCCTTGCAAGTTTTTTCAATTGGCTTTTGCTCAGTTCAACTGTGGGAGCAATCACAGGAGTCACTGGTGTTGTGTGGGTTAGCACACAAAAGGCATGGCATTGGGGTTTTTTCATCATAACCATAGCTTCCTCCGTTGGCTTTGTGACCCTTGCTCTTGGTAAACAATTCTACCGCATCAAAACTCCAGGAGATAGCCCCACTTTGAGAATTGCTCAGGTTATTGTTGTGTCTTTTAAGAACCGAAAGTTGTCATTGCCGGAGTCACATGGAGAACTATATGAAATCAGTGATAAAGATGCTACAGCTGAGAAGATTGCTCACACCAACCAGATGAGGTTCCTAGACAAAGCTGCCATCATACAAGAAAGCTCAAAACCCCAGGCATGGAAAATTTGCACTGTGACACAAGTTGAAGAAGTGAAGATCCTAACAAGAATGTTACCCATAGTAGCTAGCACCATCATACTGAACACATGTATGGCACAACTCCAAACATTCTCAGTTCAACAAGGGAATGTGATGGACCTAAAACTTGGCTCTCTAACAGTGCCAGCACCATCCATTCCTGTTATCCCACTTGTTTTTATAAGTGTCCTAGTTCCCTTGTATGAACTATTTTTTGTGCCATTTGCAAGAAAAATCACTAACCACCCTTCAGGCATAACACAACTACAAAGGGTGGGTGTAGGGTTAGTACTCTCGGCAATATCAATGGCAGTGGCAGGGATTGTGGAAGTGAAAAGAAGGGACCAAGGGAGAAAAGACCCTTCTAAGCCTATAAGCCTATTTTGGCTTTCATTCCAATATGGCATATTTGGAATTGCAGATATGTTCACCCTTGTGGGACTATTGGAGTTTTTCTATAGGGAATCACCTGCTAGCATGAAATCACTTTCAACCTCTCTCACGTGGTTGTCAACATCTCTTGGTTACTTCTTGAGCACAGTCTTTGTCAATGTTATCAATGCTGTTACCAAAAGGATCACACGAAGCAAACAAGGGTGGTTGCATGGGTTCGACTTGAACCAAAATAACCTTAACTTGTTCTATTGGTTCCTAGCCACCCTTAGTTGCCTTAACTTCTTTAACTACCTTTATTGGGCCTCAAGGTACCAATACAAACGTGAAGACTCAGGCCCAGGTTTTAAGCCTTTAGGTGAAATGCCTCTCAAAAGGGTTGAGAGAAAACAAGATTGTGAAGTTAGCCGAGAGTGA 1731 0.4356 MADHDAKEEQRPLNQWRRSKGGFMASMFIFVLSALDNMGFVANMVSIVLYFYGVMHFDLASSANTLTNFMGSTYLLSLVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASKHLHPEACGKSSCVKGGIAVMFYTSLCLLALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLLSSTVGAITGVTGVVWVSTQKAWHWGFFIITIASSVGFVTLALGKQFYRIKTPGDSPTLRIAQVIVVSFKNRKLSLPESHGELYEISDKDATAEKIAHTNQMRFLDKAAIIQESSKPQAWKICTVTQVEEVKILTRMLPIVASTIILNTCMAQLQTFSVQQGNVMDLKLGSLTVPAPSIPVIPLVFISVLVPLYELFFVPFARKITNHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGRKDPSKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPASMKSLSTSLTWLSTSLGYFLSTVFVNVINAVTKRITRSKQGWLHGFDLNQNNLNLFYWFLATLSCLNFFNYLYWASRYQYKREDSGPGFKPLGEMPLKRVERKQDCEVSRE* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1928 576 Pfam POT family 91 502 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso3g1928 576 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 557 - -
Gso3g1928 576 SUPERFAMILY MFS general substrate transporter 4 544 IPR036259 -
Gso3g1928 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso3g1928 576 Gene3D MFS general substrate transporter like domains 2 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1928 Gso-Chr3 44814467 44818719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1928 21 550 Organic Solute Cotransporters AT1G69850 42.096 1.25e-147 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1928 K14638 - gmx:100781861 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1892 19 47640842 47645391 Gso3g1928 3 44814467 44818719 GST
Gso3g1928 3 44814467 44818719 Gso10g1303 10 39117429 39121230 PCT
Gso10g1303 10 39117429 39121230 Gso3g1928 3 44814467 44818719 PCT