Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1892 ATGGCTGACCATGATGCAAAAGAAGAACAAAGGCCACTCAACCAATGGAGAAGAAGCAAAGGGGGATTCATGGCTTCCATGTTCATTTTTGTCTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCATAGTCCTATACTTTTATGGAGTGATGCACTTTGATTTGGCCAGTTCAGCCAACACCCTCACAAACTTCATGGCTTCAACCTACCTGCTTTCCCTTGTTGGAGGCTTCATCTCAGATACTTACTTGAACAGATTTACCACATGCTTGCTTTTCGGATCACTCGAGGTTCTGGCTTTGGCAATGCTCACAGTCCAAGCAGCTTCAAAACATTTACACCCTGAAGCATGTGGCAAGTCAAGCTGTGTGAAAGGTGGAATAGCAGTGATGTTCTACACATCACTGTGCTTGTTGGCATTGGGAATGGGAGGGGTGAGAGGATCCATGACTGCATTTGGAGCTGACCAATTTGATGAGAAGGATCCAACTGAGGCAAAAGCCCTTGCAAGTTTTTTCAATTGGCTTTTGCTCAGTTCAACTGTGGGAGCAATCACAGGAGTCACTGGTGTTGTGTGGGTTAGCACACAAAAAGCATGGCATTGGGGTTTTTTCATTATAACCATAGCTTCCTCTGTTGGCTTTGTGACCCTTGCTCTTGGTAAACCATTCTACCGCATCAAAACTCCAGGAGATAGCCCCACTTTGAGAATTGCTCAGGTTATTGTTGTGGCTTTTAAGAACCGTAAGTTGTCACTGCCGGAGTCACATGGAGAACTATATGAAATCAGTGATAAAGAAGCTACAGCAGAGAAGATTGCCCACACCAACCAGATGAGGTTTCTAGACAAAGCTGCCATCATCCAAGAAAACTCAAAACCCAAGGCATGGAAGGTTTGCACAGTGACACAAGTTGAAGAAGTGAAGATCCTAACAAGAGTGTTACCCATAGTAGCTAGTACCATTATACTAAACACTTGTATGGCACAACTGCAAACATTCTCAGTTCAACAAGGAAATGTGATGGACCTAAAACTTGGCTCTCTAACAGTGCCTGCACCATCCATTCCTGTTATCCCCCTTGTTTTCATAAGTGTCCTAGTTCCCTTGTATGAACTATTTTTTGTGCCATTTGCAAGAAAGATCACTCACCACCCTTCAGGCATAACACAACTACAAAGGGTTGGTGTGGGGTTAGTACTCTCGGCAATATCAATGGCAGTGGCAGGGATTGTGGAAGTGAAAAGAAGGGACCAAGGGAGAAAAGACCCTTCTAAGCCTATAAGCCTATTTTGGCTTTCATTCCAATATGGCATATTTGGCATTGCAGATATGTTCACCCTTGTGGGACTATTGGAGTTTTTCTACAGGGAATCACCTGCTAGCATGAAATCACTTTCAACCTCTCTCACGTGGCTGTCAACATCTCTTGGTTACTTCTTGAGCACAGTCTTTGTCAATGTCATCAATGCTGTTAGCAAAAGGATCACACCAAGCAAACAAGGGTGGCTGCATGGGTTCGACTTGAACCAAAATAACCTTAACTTGTTCTATTGGTTCCTTGCCACCCTTAGTTGCCTTAACTTCTTTAACTACCTCTATTGGGCCTCAAGGTACCAGTACAAACGTGAAGACTCAGGCCCTGGTTTTAAACCTTTAGGTGAAATGTCTCTCAAAAGGGTTGAGAGAAAACAAGATTGGGAAGTTAGCCAAGAGTGA 1731 0.4385 MADHDAKEEQRPLNQWRRSKGGFMASMFIFVLSALDNMGFVANMVSIVLYFYGVMHFDLASSANTLTNFMASTYLLSLVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASKHLHPEACGKSSCVKGGIAVMFYTSLCLLALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLLSSTVGAITGVTGVVWVSTQKAWHWGFFIITIASSVGFVTLALGKPFYRIKTPGDSPTLRIAQVIVVAFKNRKLSLPESHGELYEISDKEATAEKIAHTNQMRFLDKAAIIQENSKPKAWKVCTVTQVEEVKILTRVLPIVASTIILNTCMAQLQTFSVQQGNVMDLKLGSLTVPAPSIPVIPLVFISVLVPLYELFFVPFARKITHHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGRKDPSKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPASMKSLSTSLTWLSTSLGYFLSTVFVNVINAVSKRITPSKQGWLHGFDLNQNNLNLFYWFLATLSCLNFFNYLYWASRYQYKREDSGPGFKPLGEMSLKRVERKQDWEVSQE* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1892 576 Gene3D MFS general substrate transporter like domains 2 550 IPR036259 -
Gso19g1892 576 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 557 - -
Gso19g1892 576 SUPERFAMILY MFS general substrate transporter 4 544 IPR036259 -
Gso19g1892 576 Pfam POT family 91 504 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso19g1892 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1892 Gso-Chr19 47640842 47645391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1892 21 550 Organic Solute Cotransporters AT1G69850 41.563 2.53e-145 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1892 K14638 - gmx:102670258 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1892 19 47640842 47645391 Gso19g1892 19 47640842 47645391 ECH
Gso19g1892 19 47640842 47645391 Gso3g1928 3 44814467 44818719 GST
Gso19g1892 19 47640842 47645391 Gso10g1303 10 39117429 39121230 PCT
Gso10g1303 10 39117429 39121230 Gso19g1892 19 47640842 47645391 PCT