Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1919 ATGCTGCGCCTGAAAGCGTTTCGGCCTACGAGCGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTGACAGCCGATGATTCAGATCGAGTCTCGGTTTGGAACTGGGAGCACCGCCAGGTGGTGTATGAGTTGAAAGCTGGCGGAGTGGATGAACGGCGTTTGGTCGGCGCCAAGTTGGAGAAGCTCGCCGAGGGAGAAACAGAGTCAAAAGGGAAGCCGACAGAAGCCATTCGGGGAGGAAGTGTCAAGCAGGTGAATTTTTATGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGCTCTGCCGCTGCTGAGGCTCCAACAGCTGTCCATACTTCAGCTTTTAGCTCTCCTGCCCCATCAACAAAAGGGAGACATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAATAAGTCCCTTCTATGCATGGAGTTCCTTTATAGAACTGGTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTCTATCAATGCTGACGTGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCTATCTCTTGCTTGATGTCATTCATGGCTGCTTCTGGTGAGGCTCTTCTGGTTTCGGGTGCTAGTGATGGATTGTTCATAATTTGGAGTGCTGACCACGGACAGGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGAGGGGTTGTGGCAGTTGAGTTGTCAAGGGTGATGGGAGGTGCTCCTCAGCTAATCACAATTGGTGCAGATAAGACATTAGCCATATGGGACACTGTCTCCTTTAAGGAGCTGCGGCGTATAAAGCCAGTTCCCAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGTCATCCTCGAGCTCCAAACCTTGATATTCTAACTTGCGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACTTATTCTGCTCTCACGAGGCCATTGTGTGAATTGACCTCAGTTATTCCTCCACACGCCCTTGCTCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCACATACTTTGCAGCCACATCTTGTAGCTGTTGGAACCAACATTGGTGTTATTATCTGTGAGTTTGATGCTAGATCTCTTCCTCCAGTTGCTCCTCTACCAACTCCATCAGACAGTAGAGAGCATTCTGCCATATTTGTAATTGAAAGGGAATTGAAGCTATTAAATTTTCAGTTAAACAACTCTGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACAGGAAGACCCAAGGGAGATTTTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCACATTAGTACTCCTGTTCCACATGATTCGTATTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTTAGTGATTGGTCAATTGTTGACTCTGGAAGTGCAAGACTTCTCGCTTGGGATGCTTGTCGTGACAGATTTGCTATATTGGAATCAGCGTCACCGCCTAGAATTCCTATAATTCCCAAGGGTAGTTCATCAAAAAGAGCTAAAGAAGCTGCTGCAGCACAAGCAGCTGCTGCAGCTGCTGCTGCTGCTTCCACAGCTTCTGTTCAAGTCCGCATCTTGTTAGATGATGGAACATCAAATATACTGATGAGGTCTGTTGGCGCACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTACCGAACATCTAGGAGAGTCAGTCCTATTGCTGCTACAGCTATTTCAACAATCCAGTCTATGCCCTTATCAGGCTATGGAAGCAGCGGTGTTTCTTCTTTTTCTACTTATGATGATGGATTTTCTTCACAAAGACCTCCTACTGAGGCGGCACCTCAAAACTTCCAGTTATACAGTTGGGAGACATTTCAGCCTGTGGGGGGTTTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCGTTGAGTACTGTGCATTTGCATACCAGCAATACATAGTCATATCTTCTTTGCGCCCTCAATATAGATACTTGGGAGATGTTGCAATCCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGCTACCCCAACTACTATAGAAATTGTTTTTGTGGATGCTGGGGTTGCTCAAATTGACATTGAAACTAAGAAGATGAAAGAAGAGCAAAAAATGAAAGAAGCACAGGCAAGAGCAGTGGCAGAGCATGGAGAGTTAGCACTAATTACTGTAGAAGGTATCCAGTCTGCCAAGGAAGAAAGAATAGCATTGAGGCCACCAATGTTGCAGGTGGTTCGGTTGGCTTCATTTCAGCATGCTCCTTCAGTTCCACCTTTCATATCATTACCAAAACAATCTAGAGTTGATAGTGATGACTCTTGGATGGCAACAGAAGAGAGAAAGGCAGGTGAGGTGGCAGTTGGTGGTGGTGGGGTGTCTGTGGCAGTTACTCGTTTTCCAATGGAGCAGAAGCGTCCTGTTGGGCCTCTTGTGGTTGTAGGTGTCAGGGATGGAGTTCTTTGGCTAATTGACAGGTACATGGTTGCTCATGCCGTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGACTTGGAAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCTAAGAGGTTGGAGTTTGATTTGGCAATTAAGAGCAATGATTTGAGAAGAGCTCTTCATTGTCTTCTTACCATGAGTAATAGCAGAGATATTGGACATGATGGTACTCAAGGACTTGGTTTGAATGACATTCTTAATTTATCAGATAAAAAACCAAATAAAGTATCTGATAAAAAACAAGATATAGTTGAAGGTGTTCAGGGTATAGTGAAATTCGCAAAAGAGTTTTTGGATCTTATTGATGCTGCAGATGCTACAGCACAGAGTGAAATTGCCCGTGAGGCTCTCAAGAGGTTAGCTGCAGCTGGTTCGGTCAAAGGTGCTTTAGAAGGTCATGAATTGAGAGGATTAGCATTACGCCTAGCAAATCATGGAGAGTTGACTCGGCTAAGTAGTTTGGTTAACAACTTAGTCACGCTTGGCTTGGGACGGGAAGCTGCATTTGCTGGTGCTGTTTTGGGTGACAATGCTCTGATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACATGGACGTCCAACTTTGAAGAACTTAGTTCAGATTTGGAACCAAGCGCTACAGAGAGAGGTTGAACCTACTCCATCACAGAAGACAGATGCTGCAGCTGCATTTTTAGCTTCTCTTGAGGAGCCTAAGCTCACAAGTTTGGCAGATGCAGGGAAGAAACCACCTATTGAAATCCTGCCTCCGGGGATGCCACCTCTTAATGGTCCTATTTCCATCCAGAAAAAACCAGCTTCTGCTGCACAGAATTCCCAACAACCCCCAGGCAAGCCTTTGGCACTGGAAGCACCTCCTACAACCACAGCTGCACAAGAGAGTGCTACAACACAGCAGCCTGAATCCACACCTGCATCAGGTAATGATCCACCTCCATCGGAGTCTACCTCAGACACCAGGCCAGCTCCTGCGACTGCTCCACCTCAACCAGAATCAGGTGAAAGCACTGTAGATAATGGCATTCCTACCTCTACACCAGCAAGTGATGGAGATCCAAATGTTAATGGTGAAAATGTTCAAGCAGCATCTACGAGCAATCCAGCACCAGCACCAACACCACCTGATTTCCCCGTATCACCAGCAGCTGAGGTTTCAGAGACTACTGCTCCAAGTCCACCTACAGTTCCAACTCCACCTGCAGTTCCTACGAGTGATCCCCTTATATGA 4035 0.4585 MLRLKAFRPTSDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGGDGPLVAFGASDGVIRVLSMLTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLFIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPHALAPNKKLRVYCMVAHTLQPHLVAVGTNIGVIICEFDARSLPPVAPLPTPSDSREHSAIFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDACRDRFAILESASPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAASTASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSGVSSFSTYDDGFSSQRPPTEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKMKEEQKMKEAQARAVAEHGELALITVEGIQSAKEERIALRPPMLQVVRLASFQHAPSVPPFISLPKQSRVDSDDSWMATEERKAGEVAVGGGGVSVAVTRFPMEQKRPVGPLVVVGVRDGVLWLIDRYMVAHAVSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAIKSNDLRRALHCLLTMSNSRDIGHDGTQGLGLNDILNLSDKKPNKVSDKKQDIVEGVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAGSVKGALEGHELRGLALRLANHGELTRLSSLVNNLVTLGLGREAAFAGAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQIWNQALQREVEPTPSQKTDAAAAFLASLEEPKLTSLADAGKKPPIEILPPGMPPLNGPISIQKKPASAAQNSQQPPGKPLALEAPPTTTAAQESATTQQPESTPASGNDPPPSESTSDTRPAPATAPPQPESGESTVDNGIPTSTPASDGDPNVNGENVQAASTSNPAPAPTPPDFPVSPAAEVSETTAPSPPTVPTPPAVPTSDPLI* 1345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1919 1344 MobiDBLite consensus disorder prediction 1199 1213 - -
Gso3g1919 1344 Gene3D - 902 1159 - -
Gso3g1919 1344 ProSiteProfiles Trp-Asp (WD) repeats profile. 256 300 IPR001680 GO:0005515
Gso3g1919 1344 PANTHER TSET COMPLEX MEMBER TSTF 1 1271 - -
Gso3g1919 1344 Gene3D - 3 350 IPR015943 GO:0005515
Gso3g1919 1344 MobiDBLite consensus disorder prediction 1173 1344 - -
Gso3g1919 1344 MobiDBLite consensus disorder prediction 1223 1258 - -
Gso3g1919 1344 Coils Coil 751 771 - -
Gso3g1919 1344 PANTHER BNAC07G49640D PROTEIN 1 1271 - -
Gso3g1919 1344 MobiDBLite consensus disorder prediction 1327 1344 - -
Gso3g1919 1344 SMART WD40_4 1 39 IPR001680 GO:0005515
Gso3g1919 1344 SMART WD40_4 249 291 IPR001680 GO:0005515
Gso3g1919 1344 SMART WD40_4 197 240 IPR001680 GO:0005515
Gso3g1919 1344 MobiDBLite consensus disorder prediction 1265 1302 - -
Gso3g1919 1344 SUPERFAMILY WD40 repeat-like 5 496 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1919 Gso-Chr3 44738275 44750812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1919 - - gmx:100777567 2481.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1884 19 47564078 47577310 Gso3g1919 3 44738275 44750812 GST