Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1915 ATGGGTTGGAAAGGAGGTCTCAAAAACGTGGTCACCATGTTTACTTTCATGGTGGCCTTGGTTGTTGTTCAACATGTGAAGTGTGGGGACTCAGCTCGCATGTTACTTCAGCACGGTGGCTTCGTTCAACGAAGTGGCACCAACTTCGTTCTGAGTAACAGGCATTTCTACTTCAACGGATTCAACGCGTACTGGTTAATGTACATGGCATCTGACCCAGCCACAAGGCCCAAGGTCACTGCCGTTTTGCAACAAGCTTCTAGCCATGGCTTAACTGTTGCTAGAACTTGGGCTTTCAGTGATGGAGGTTATAGAGCCCTTCAGGTTTCTCCTGGTTCCTACGACGAGAAAGTATTCAGGGGATTGGACTTTGTAGTATCAGAAGCGGGAAAATATGGGGTGCGTTTGATACTGAGCTTGGTGAACAACTGGAAAGATTTTGGTGGCAAAAATCAGTACGTACAGTGGGTGAAGGAACATGGACAGTACGTGAACAGTGAAGATGATTTCTTTTCACATCCTATTGCTAAGCAACATTACAAAAACCATATTAAGGCTGTGTTGACAAGAAAAAACACAATAACTGGGGTGGCATATAAGGACGATCCTGCCATATTTGCGTGGGAACTTATCAATGAACCCCGTTCCCAACACGACAACTCCGGAAAAGTTATTCAGCAATGGGTGATTGAGATGGCTGCCTACGTCAAATCCATCGACAACAATCATTTGTTAGAAATAGGACTCGAAGGGTTCTATGGTGAAACAATGCCAGAGAAAAAACAATTCAATCCTGGGTACCAACTTATTGGCACTGATTTCATTTCTAACAACCTAGTTCACCAAGTTGATTTTGCTACCATGCATCTCTACCCTGAACAATGGTTGCCAGGCTCAAACGAAGCTGCTCAGGTTGCATTTGTTGACAAATGGTTACAAACACACATTCAAGATGCCAAAAATGTTCTGGGGAAGCCTATTGTTGTTGGTGAGTTTGGCAAGTCTTCGAAGTCATATAGTGTGGTTGAAAGGGACAATTACCTGAGCAAAATGTATAATGCCATATACAGTAGTGCTAGTAGTGGGGGACCCTGTGCTGGTGGGCTTTTTTGGCAGCTCATGGCTAAAGGAATGGATGGTTTACGTGATGGTTATGAAGTCATCTTTGAGGAGAGTCCTTCAACTACCAGAATTATAGATCAACAATCCCACAAAATGTCAAGTATTGCTTAG 1233 0.4363 MGWKGGLKNVVTMFTFMVALVVVQHVKCGDSARMLLQHGGFVQRSGTNFVLSNRHFYFNGFNAYWLMYMASDPATRPKVTAVLQQASSHGLTVARTWAFSDGGYRALQVSPGSYDEKVFRGLDFVVSEAGKYGVRLILSLVNNWKDFGGKNQYVQWVKEHGQYVNSEDDFFSHPIAKQHYKNHIKAVLTRKNTITGVAYKDDPAIFAWELINEPRSQHDNSGKVIQQWVIEMAAYVKSIDNNHLLEIGLEGFYGETMPEKKQFNPGYQLIGTDFISNNLVHQVDFATMHLYPEQWLPGSNEAAQVAFVDKWLQTHIQDAKNVLGKPIVVGEFGKSSKSYSVVERDNYLSKMYNAIYSSASSGGPCAGGLFWQLMAKGMDGLRDGYEVIFEESPSTTRIIDQQSHKMSSIA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1915 410 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 13 409 - -
Gso3g1915 410 PANTHER - 13 409 IPR045053 GO:0004553
Gso3g1915 410 Pfam Cellulase (glycosyl hydrolase family 5) 60 354 IPR001547 GO:0004553|GO:0071704
Gso3g1915 410 SUPERFAMILY (Trans)glycosidases 41 400 IPR017853 -
Gso3g1915 410 Gene3D Glycosidases 37 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1915 Gso-Chr3 44697058 44701522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1915 10 409 Glycoside Hydrolase AT5G66460 54.478 2.01e-158 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1915 K19355 - gmx:778029 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1880 19 47519034 47524018 Gso3g1915 3 44697058 44701522 GST