Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1880 ATGGCTCCTGAACTTGTCCCCACCGTTGTGAAATCCAGTGCTGCGTTCACGAAACCCGCGACCCTTCCAAGGCGTGCCTACGTGACATTCCTCGCCGGAAACGGTGACTACGTGAAAGGGGTGGTTGGCCTCGCCAAAGGGTTGCGAAAGGTGAAAACCGCGTACCCGTTGGTGGTGGCTGTCCTCCCCGATGTGCCGGAGGAGCACCGTAAGATCCTGGAGTCTCAGGGCTGCATCGTTCGCGAGATCGAACCCGTTTACCCACCCGAAAACCAAACCCAGTTTGCCATGGCTTATTACGTCATCAACTACTCCAAGCTCCGTATATGGGAGTTTGTGGAGTACAGCAAGATGATATACTTGGACGGAGACATTGAGGTATATGAGAACATAGACCACCTATTTGACCTACCTGATGGTAACTTTTACGCTGTGATGGATTGTTTCTGCGAGAAGACATGGAGTCACACCCCTCAGTACAAGGTGGGTTACTGCCAGCAATGCCCGGAGAAGGTGCGGTGGCCCACCGAATTGGGTCAGCCCCCTTCTCTTTACTTCAACGCTGGCATGTTCGTGTTCGAACCCAACATCGCCACCTATCATGACCTATTGAAAACGGTGCAAGTCACCACTCCCACCTCGTTCGCTGAACAAGATTTCTTGAACATGTACTTCAAGGACATTTACAAGCCAATCCCTTTAAATTACAATCTTGTCCTCGCCATGCTGTGGCGCCACCCGGAAAACGTTAAATTAGACCAAGTCAAGGTTGTTCACTATTGCGCAGCGGGGTCCAAGCCATGGAGATATACGGGGAAGGAAGAGAATATGCAGAGGGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGATATCTACAATGATGCTTCGCTTGACTACAAGCCATTGATGAATGCAAGTGAAGCTCCAGCAGCGGATGGTGTTGACATTGAACAATTCGTGCAGGCTCTATCAGAGGTTGGTCATGTTCAATATGTCACCGCGCCTTCAGCAGCTTAA 1020 0.5059 MAPELVPTVVKSSAAFTKPATLPRRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRKILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIEVYENIDHLFDLPDGNFYAVMDCFCEKTWSHTPQYKVGYCQQCPEKVRWPTELGQPPSLYFNAGMFVFEPNIATYHDLLKTVQVTTPTSFAEQDFLNMYFKDIYKPIPLNYNLVLAMLWRHPENVKLDQVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYNDASLDYKPLMNASEAPAADGVDIEQFVQALSEVGHVQYVTAPSAA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1880 339 CDD GT8_Glycogenin 25 296 - -
Gso3g1880 339 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 339 - -
Gso3g1880 339 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 302 IPR029044 -
Gso3g1880 339 PANTHER GALACTINOL SYNTHASE 1 1 339 - -
Gso3g1880 339 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Gso3g1880 339 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 299 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1880 Gso-Chr3 44360183 44362658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1880 1 339 Glycosyltransferase AT1G56600 74.118 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1880 K18819 - gmx:100809287 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1844 19 47150709 47152875 Gso3g1880 3 44360183 44362658 GST