Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1844 ATGGCTCCTGAACTTGTCCCCACCGTTGCGTTCACGAAACCCGCAACCCTTCCAAGGCGTGCCTACGTGACATTCCTCGCCGGAAACGGTGACTACGTGAAAGGGGTCGTTGGTCTTGCCAAAGGGTTGCGAAAGGTGAAAACCGCGTACCCATTGGTGGTGGCGGTCCTCCCAGATGTGCCGGAGGACCACCGTAAGATCCTGGAGTCTCAGGGCTGCATCGTCCGCGAGATCGAACCCGTTTACCCGCCCGAAAACCAAACCCAGTTCGCCATGGCTTATTACGTCATTAACTACTCCAAGCTCCGTATATGGGAGTTTGTGGAATACACCAAGATGATATACTTGGACGGAGACATTCAGGTATATGAGAACATAGACCACCTATTTGACCTACCTGGTGGTTACTTTTACGCTGTGATGGATTGTTTCTGCGAGAAGACATGGAGTCACACCCCTCAGTACAAGGTGGGGTACTGCCAGCAATGCCCGGAGAAGGTGCAGTGGCCCACCGAATTGGGCCAGCCACCTTCTCTTTACTTCAACGCCGGCATGTTCGTGTTCGAGCCCAGCATCGCCACCTACCATGACCTATTAAAAACAGTGCAAGTCACCACTCCCACTTCGTTCGCAGAACAAGATTTCTTGAACATGTACTTCAAGGATATTTACAAGCCAATCCCTTTAAATTACAATCTTGTCCTTGCCATGCTCTGGCGCCACCCAGAAAATGTTAAATTAGACCAAGTCAAGGTTGTTCACTATTGCGCAGCGGGGTCGAAACCGTGGAGATATACGGGGAAGGAAGAGAACATGCAGAGGGAGGACATAAAGATGCTGGTGAAAAAATGGTGGGATATCTACAATGATGCTTCGCTTGACTACAAGCCATTGATGAGTGCAAGTGAAGCTCCAGCACCGGATGGTGTTGACAATATTGAACCATTCGTGCAGGCTCTGTCAGAGGTTGGTCATGTTCAATATGTCACTGCGCCCTCAGCAGCTTAA 1008 0.503 MAPELVPTVAFTKPATLPRRAYVTFLAGNGDYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEDHRKILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYTKMIYLDGDIQVYENIDHLFDLPGGYFYAVMDCFCEKTWSHTPQYKVGYCQQCPEKVQWPTELGQPPSLYFNAGMFVFEPSIATYHDLLKTVQVTTPTSFAEQDFLNMYFKDIYKPIPLNYNLVLAMLWRHPENVKLDQVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYNDASLDYKPLMSASEAPAPDGVDNIEPFVQALSEVGHVQYVTAPSAA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1844 335 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 18 295 IPR029044 -
Gso19g1844 335 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 297 IPR029044 -
Gso19g1844 335 Pfam Glycosyl transferase family 8 24 266 IPR002495 GO:0016757
Gso19g1844 335 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 335 - -
Gso19g1844 335 CDD GT8_Glycogenin 20 291 - -
Gso19g1844 335 PANTHER GALACTINOL SYNTHASE 1 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1844 Gso-Chr19 47150709 47152875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1844 1 335 Glycosyltransferase AT1G56600 74.852 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1844 K18819 - gmx:100819991 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1844 19 47150709 47152875 Gso3g1880 3 44360183 44362658 GST