Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1864 ATGGAAGATTTGGGAGGTACCCAGTTCGACGGCCTCAGCAATGCTGTGAGGAGGAAGAGGAGTCAGACTTCGCGCAGGCCTCGGCCTGATTCACAGCATGCTTCTGAAGGTCAGGAACTGTCTCCCTTGTCGTCGACGCCTTCGGAGGATGCTGGCAAGGCCTCTAGTGATGAGAATGTTGGTTACGATGCGAATTCCAAGAGAAAGGAATTCAATCTTAACCATTGTGTCTCTCAAACCTCCTCTGGTACTGGAGCTGAAGAAGAAAAATCCCATAAAAAGAGTAAAAAAGATGGAGGGTTCCATACATTTTATAGTAATGAGCCTGTACGGAGCGGTTCAAATAATAAACGCTGTAGTGAAGGGGTTCTTGCTCCAGCAAATTGGAAAGGTTCTAGCAAAACAAAGGATAGCTTGGATTCAGAGTTGAGAAATGCAGATTTGTATGGTGGAAGGAATCCTGAGAGCATGAGTCTGGCACAGTTTGGTGGCTCTCAGGATGGATTGGGGAATGAGAACCGAGTTAAAAAGGTTAAACTCAAGGTTGGCGGAGTGACACGTACTATTCAAGCCAATTCGGCAACCAATGGTGCTTCGGGAAGTGGAACAACAATGAAGTCTCGTTCATCAGATGCCTCCAGACCACGCCAAAAGCAACAGAGTAATTCAGACGATAATAACTCTCCTTCGGATAAGAGGAGTCGTCTACAAGGTGTTCCGTGGAAGGATTTCTCGAGGGGTGGTTTTGGTCTTGGGAAGGAGGAATCATTGATGGGGAAGATTTCTGGAAAGAACACAACTAGTAAGCTGGGAGACAAGTCTGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAGAGACGTGTACTTGATGGGGAATTTGGTGATGACGATGACGAGGATGATGAGATTCGGTACTTGGAAAAGCTGAAAACGTCAAAAGTTTCTGCAGTCTATAGAGATGAAGAAGAATTAAACAAGAAACATCGAAAGCTATCTAGTGTCTCTAATTTGGAAAATGCTGCCCCAAGGTCAGGCAAAGACGGTAAGAAAAGGTCTAGATCTGATAGAGTGTATGAGGACACAGATTATGAGGATGAAGACGAGTCAGGGTCTGATGGTGAGCTTGAGGATAAGAAAAAGAAAAAACAGAGGAAGGAATCTGTTGATGTATTGATGGACAGTAAGAGGGAAATGACTCTTACGACTCGTCAACGGGCCCTTCAATCAAGTAAAGATGCCTCTGCATCTAGTGCTAGTGTAATTGAGTTTCCCAACGGATTACCACCTGCCCCGCCTAGAAAACAAAAGGAGAAGCTTTCAGAGGTCGACCAGCAACTGAAGAAAGCTGAGGCTGCGCAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGAAGCTATCAGGAAAATACTTGGTCAAGACTCCAGTAGGAAAAAGCGAGAAGAGAAAATAAAGAAGCGCCAGGAAGAACTGGCACAGGAAAGGGCAGCCAATGCACTAATGCTTGCATCAAATACCATCAGATACACAATGGGTCCGACTGGAACGTTTGTGACTTTTTCTGAGGAAATGGGGCTTCCTAGCATATTGAACTCCAAACCTGTCAGTTATCCCCCACCTCGTGAGAAGTGTGCTGGTCCATCTTGTACAAATCCTTATAAGTATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTCCAGGAGAAGGTGGTGGCTGAAACTACCTGTTGA 1764 0.4569 MEDLGGTQFDGLSNAVRRKRSQTSRRPRPDSQHASEGQELSPLSSTPSEDAGKASSDENVGYDANSKRKEFNLNHCVSQTSSGTGAEEEKSHKKSKKDGGFHTFYSNEPVRSGSNNKRCSEGVLAPANWKGSSKTKDSLDSELRNADLYGGRNPESMSLAQFGGSQDGLGNENRVKKVKLKVGGVTRTIQANSATNGASGSGTTMKSRSSDASRPRQKQQSNSDDNNSPSDKRSRLQGVPWKDFSRGGFGLGKEESLMGKISGKNTTSKLGDKSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELNKKHRKLSSVSNLENAAPRSGKDGKKRSRSDRVYEDTDYEDEDESGSDGELEDKKKKKQRKESVDVLMDSKREMTLTTRQRALQSSKDASASSASVIEFPNGLPPAPPRKQKEKLSEVDQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQEELAQERAANALMLASNTIRYTMGPTGTFVTFSEEMGLPSILNSKPVSYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQEKVVAETTC* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1864 587 PANTHER INO80 COMPLEX SUBUNIT B 1 587 IPR029523 GO:0006338|GO:0031011
Gso3g1864 587 MobiDBLite consensus disorder prediction 86 101 - -
Gso3g1864 587 Coils Coil 442 469 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 186 227 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 401 421 - -
Gso3g1864 587 Coils Coil 481 501 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 271 292 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 107 121 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 343 359 - -
Gso3g1864 587 Pfam HIT zinc finger 544 575 IPR007529 -
Gso3g1864 587 MobiDBLite consensus disorder prediction 71 85 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 434 493 - -
Gso3g1864 587 Pfam PAPA-1-like conserved region 444 528 IPR006880 GO:0031011
Gso3g1864 587 SMART PAPA_1_2 443 528 IPR006880 GO:0031011
Gso3g1864 587 MobiDBLite consensus disorder prediction 1 300 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 373 400 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 318 333 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 34 53 - -
Gso3g1864 587 MobiDBLite consensus disorder prediction 318 493 - -
Gso3g1864 587 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1864 Gso-Chr3 44208451 44212736 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1864 - - gmx:100793005 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1827 19 46994681 46999005 Gso3g1864 3 44208451 44212736 GST