Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1827 ATGGAAGATTTGGGAGGTACCCGGTTTGATGGCCTCAGCAATGCTGTGAGGAGGAAGAGGAGTCAGACTTCGCGCAGGCCTCGGCCTGATTCGCAGCATGCTTCTGAAGGTCAGGAACTGTCTCCCTTGTCTTCGACACCTTCGGAGGATACTGGTAAGGCCTCTAGTGATGAGAATGTTGGTTATGATGCAAATTCCAAGAGAAAGGAATTCAATCTTAACCATTGTGTCTCTCAAACCTCCTCTGGTACTGGAGCCGAAGATGATAAATCCCATAAAAAGAGTAAAAAAGATGAAGGATTCCACACGTTTTATAATAATGAGCCTGTACGGAGCGGTTTGAATAATAAACGCTGTAGTGAAGGTGTTCTTGCTCCAGCAAATTGGAAAGGCTCTAGCAAAGTGAAGGATAGCTTGGATTCAGAGTTGAGAAATGCAGATTTGTATGGTGGAAGGAATCCTGAGAGCATGGGTTTGGCACAGTTTGGTGGCTCTCAGGATGGATTGGGGAATGAGAACCGGGTTAAAAAGGTTAAACTCAAGGTTGGCGGAGTGACACGCACTATTCAAGCCAATTCAGCAACCAATGGTGCTTCGGGAAGTGGATCAACAATGAAGAACTCTCGTTCATCAGATGCCTCCAGACCACGCCAAAAGCAACAGAGTAATTCAGACGATAATAATTCTCCTTCTGATAAGAGGAGTCGTCTACAAGGTGTTCCGTGGAAGGATTTCTCAAGGGGTGGTTTTGGTCTTGGGAAGGAGGAATCATTGATGGGGAAGATTTCTGGAAAGAACACATCTAGTAAGCTGGGAGACAAGTCTGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAGAGACGTGTACTTGATGGGGAATTTGGTGATGATGATGATGAGGATGATGAGATTCGGTACTTGGAAAAGCTGAAAACGTCAAAAGTTTCTGCAGTCTATAGAGATGAAGAAGAATTAAGCAAGAAACATCGAAGGCTATCTAGTGTCTCTAATTTGGAAAATGCTGCCCCAAGGTCAGCCAAAGATGGTAAGAAAAGGTCTAGATCTGATAGAGTGTATGAGGACACAGATTATGAGGATGAAGAGGAGTCAGGGTCTGATGGTGAGCTTGAGGATAAGAAAAAAAAAAAACAGAGGAAGGAATCTGTTGACGTATTGATGGACAGTAAGAGGGAAATGACTCTTACGACTCGTCAACGGGCCCTTCAATCAAGCAAAGATGCCTCTGCATCTAGTTCTAGTTTAATTGAGTTTCCCAACGGGTTACCACCTGCCCCACCAAGAAAACAAAAGGAGAAGCTTTCAGAGGTCGATCAGCAATTGAAGAAAGCTGAGGCTGCACAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCCAGGGAATCTGAGGCTGAAGCTATCAGGAAAATACTTGGTCAAGACTCCAGTAGGAAAAAGAGAGAAGAGAAAATAAAGAAGCGCCAGGAAGAACTGGCACAGGAAAGGGCAGCCAATGCACTAATGCTTGCATCGAATACCATCAGATACACAATGGGTCCGACTGGAACGTTTGTGACTTTTTCCGAGGAAATGGGGCTTCCTAGCGTATTGAACTCCAAACCCGTCAGTTATCCCCCACCTCGTGAGAAGTGTGCTGGTCCATCTTGTACAAATCCTTATAAGTATCGGGATTCAAAATCAAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTCCAAGAGAAGGTGGTGGCTGAAACTACCTGTTGA 1767 0.451 MEDLGGTRFDGLSNAVRRKRSQTSRRPRPDSQHASEGQELSPLSSTPSEDTGKASSDENVGYDANSKRKEFNLNHCVSQTSSGTGAEDDKSHKKSKKDEGFHTFYNNEPVRSGLNNKRCSEGVLAPANWKGSSKVKDSLDSELRNADLYGGRNPESMGLAQFGGSQDGLGNENRVKKVKLKVGGVTRTIQANSATNGASGSGSTMKNSRSSDASRPRQKQQSNSDDNNSPSDKRSRLQGVPWKDFSRGGFGLGKEESLMGKISGKNTSSKLGDKSEPVRKSKRVPKRRVLDGEFGDDDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRRLSSVSNLENAAPRSAKDGKKRSRSDRVYEDTDYEDEEESGSDGELEDKKKKKQRKESVDVLMDSKREMTLTTRQRALQSSKDASASSSSLIEFPNGLPPAPPRKQKEKLSEVDQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKIKKRQEELAQERAANALMLASNTIRYTMGPTGTFVTFSEEMGLPSVLNSKPVSYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQEKVVAETTC* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1827 588 Pfam PAPA-1-like conserved region 445 529 IPR006880 GO:0031011
Gso19g1827 588 MobiDBLite consensus disorder prediction 34 61 - -
Gso19g1827 588 Pfam HIT zinc finger 545 576 IPR007529 -
Gso19g1827 588 PANTHER INO80 COMPLEX SUBUNIT B 1 588 IPR029523 GO:0006338|GO:0031011
Gso19g1827 588 MobiDBLite consensus disorder prediction 86 104 - -
Gso19g1827 588 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 588 - -
Gso19g1827 588 SMART PAPA_1_2 444 529 IPR006880 GO:0031011
Gso19g1827 588 MobiDBLite consensus disorder prediction 435 494 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 1 115 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 320 334 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 320 494 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 145 303 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 374 401 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 402 424 - -
Gso19g1827 588 Coils Coil 482 502 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 71 85 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 186 228 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 272 293 - -
Gso19g1827 588 Coils Coil 443 470 - -
Gso19g1827 588 MobiDBLite consensus disorder prediction 344 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1827 Gso-Chr19 46994681 46999005 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1827 - - gmx:100814323 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1827 19 46994681 46999005 Gso3g1864 3 44208451 44212736 GST