Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1858 ATGGAGAGACAGAGAAGTTTCTCCTTCAAACCCACTAGGCTTTTGGTCTTCTCTTTCACTATTTTTTCCTCCATCCTCTTCCTCTCTACCTTCACCACCTGGCTCACCAATTACACACCTTCAATTCACCAACAGATTCATCTTTACTTCAACACTTCTACTTCTTCTTCTTCTGTCGGTGACGGTGAAAGTGACAGTGTGGCTCTTCCACCTTTAACTGTTCATTCCTTGACCAAAAACTTAACTGTAAATGTCGTGAAAGTTCCAACTTTGATCGATAACCGTCTTGCTAGGACCCAGAAAAGCCTCTCTGGATCCAAATCTGAACCTGTACGACACCATGTCGGTGCCTCAAATGTTAATTTCACGTCAATGGAAGAGTATGGAACTTCACCTGAGAGGGTACCCAGCAAGGAAGAGAAGAAGGTAGTAGCAGGTGATTTAGTTGGGAAAACTCAAGTTCCTATTTTGAAGAAGATTGAGCAGAAGAAGAGAGTTGAAGGGTGTGATTTAACAAAAGGGTATTGGGTTTTTGATGAAAGCTATCCCCTTTATTCCAAAGTTTCTTGTCCTTTCATCGATGAAGGTTTTGATTGTGAGGGAAATGGAAGATTGAATAGAAGCTACACTAAGTGGAGATGGCAGCCCAAAGGGTGTGACCTTCCAAGGTTCAATGCAACAAAAATGCTGGAGTTGATAAGGGGGAAAAGACTTGTTTTTGTGGGTGATTCGATTAATAGAAACCAATGGGAATCAATGTTGTGCATGTTATTGGGTGCTATTAAAGATCCAACGAGAGTGTATGAGTCCCGTGGAAGGAAAATCACGAAAGAGAAGGGAAATTATAGTTTCAGGTTTCTGGATTATCAATGTACTGTTGAATACTATGTTAGTCATTTCTTAGTTCATGAAAGCAAGGCAAGAATAGGGCAGAAACGAAGATCGACATTGCGAATTGATGCCATTGATCACGGTTCATCGAGATGGAGGGGAGCTGATATTGTGGTTTTCAACACTGCACATTGGTGGTCACATTCCAAAACACAAGCCGGGATTTATTACTACCAAGAAAGAGGTCTAGTTCATCCCCAGCTAAATGTTTCTACAGCTTTCAGAAAAGCTTTGAAGACTTGGGCTTCATGGGTGGACAAACACATTAATCATAGAAAAACCCACGTTTTCTTTCGAAGTTCAGCACCATCACATTTCAGGGGTGGCGATTGGAATTCCGGAGGGCATTGTACAGAAGCCACCCTTCCTCTTAATAAAACCTTAAGCACTACTTATCCAGAGAAGAATATAATCGCAGAGGAGGTAATAAAGCAAATGAGAACTCCTGTGACATTGTTGAATATAACTAGTTTGTCAGCATATAGGATCGATGGTCACCCGTCAATTTATGGGAGAAAAACACGGTCGTCTAGGATTCAAGATTGTAGCCATTGGTGCCTTCCGGGGGTTCCAGATACATGGAATGAATTGTTATATTTTCATTTACAGAGTAGATGA 1509 0.4129 MERQRSFSFKPTRLLVFSFTIFSSILFLSTFTTWLTNYTPSIHQQIHLYFNTSTSSSSVGDGESDSVALPPLTVHSLTKNLTVNVVKVPTLIDNRLARTQKSLSGSKSEPVRHHVGASNVNFTSMEEYGTSPERVPSKEEKKVVAGDLVGKTQVPILKKIEQKKRVEGCDLTKGYWVFDESYPLYSKVSCPFIDEGFDCEGNGRLNRSYTKWRWQPKGCDLPRFNATKMLELIRGKRLVFVGDSINRNQWESMLCMLLGAIKDPTRVYESRGRKITKEKGNYSFRFLDYQCTVEYYVSHFLVHESKARIGQKRRSTLRIDAIDHGSSRWRGADIVVFNTAHWWSHSKTQAGIYYYQERGLVHPQLNVSTAFRKALKTWASWVDKHINHRKTHVFFRSSAPSHFRGGDWNSGGHCTEATLPLNKTLSTTYPEKNIIAEEVIKQMRTPVTLLNITSLSAYRIDGHPSIYGRKTRSSRIQDCSHWCLPGVPDTWNELLYFHLQSR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1858 502 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 120 501 IPR029962 GO:0016413
Gso3g1858 502 PANTHER - 120 501 IPR029965 -
Gso3g1858 502 Pfam PMR5 N terminal Domain 168 220 IPR025846 -
Gso3g1858 502 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 221 496 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1858 Gso-Chr3 44171747 44174708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1858 - - gmx:100790898 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1822 19 46953930 46956856 Gso3g1858 3 44171747 44174708 GST