Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1822 ATGGAGAGGCAGAGAAGTTTCTCCTTCAAACCCACTAGGCTTTTGGTCTTCTCATTCACTATCTTTTCCTCCGTCCTCTTCCTTTCCACCTTCACCACTTGGCTCACCAATTACACACCTTCAATTCACCAACATATTCATCTTTACTTCAACACTTCTACTTCTTCTTCTGTCGGTGATAGTGTGGTTCTTCCACCTTTAACTGGTCATTCCTTGACAAAAAACTTCACTGTAATAAGTGTTGTGAAAGTTCCAACTTTGATCGATAACCGTCTTGCTAGGACCCAGAAAAGCATCTCTGGATTCAAATCTGAACCTGTAAGACATCATGTCGGTGCCTCAAATGCTAATTTCACGTCAATGCAAGAGTATGGAACTTCACCTGAGAGGGTACCCAGCAAGGAAGAGAAGAAGGTAGTAGCAGGTGGTTTAGTTGGGAAAACTCAAGTTCCTATTTTGAAGAAGATTGAGCAGAAGGGAGTTGAAGGGTGTGATTTAACAAAAGGGTATTGGGTTTTTGATGAAAGCTATCCCCCTTATTCCAAAGATTCATGTCCTTTCATAGATGAAGGTTTTGATTGTGAGGGAAATGGAAGATTGGATAGAAGCTACACTAAGTGGAGATGGCAGGCCAAAGGGTGTGACCTTCCAAGGTTCAATGCAACAAAAATGCTGGAGTTGATAAGGGGGAAAAGGCTTGTTTTTGTGGGTGATTCGATTAATAGGAACCAATGGGAATCAATGTTGTGCATGCTATTGGGTGCTATTAAAGATCCAACGAGAGTATATGAGACCCATGGAAGGAAAATCACGAAAGAGAAGGGAAATTATAGTTTCAGGTTTCTGGATTATCAATGTACAATTGAATACTATGTTAGTCATTTCTTAGTTCATGAAAGCAAGGCAAGAATAGGGCAGAAACGAAGACCAACCTTGCGAATTGATGCCATTGATCATGGTTCATCGAGATGGAGGGGAGCTGATATTGTGGTTTTCAACACTGCACATTGGTGGTCACATTCCAAAACACAAGCTGGGATTTATTACTACCAAGAAGGAAGTGTAGTTCATCCCCAGCTAAATGTTTCTACAGCTTTCAGAAGAGCTTTGAAGACTTGGGCTTCATGGGTGGACAAACGCATTAATCATAGAAAAACCCGCATTTTCTTTCGAAGTTCAGCACCATCACATTTCAGGGGTGGTGATTGGAATTCCGGAGGGCATTGTACAGAAGCCACTCTTCCTCTCAATGAAACCTTAAGCACTAATTATCCAGAGAAGAACATAATCGTAGAGGAGGTAATAAAGCAAATGAAAACTCCCGTGACATTGTTGAATATAACTAGTTTGTCAGCATATAGGATCGATGGCCACCCATCAATTTATGGGAGAAAAACACGGTCCTCTAGGATTCAAGATTGTAGCCATTGGTGCCTTCCTGGGGTTCCAGATACATGGAATGAATTGTTATATTTTCATTTACAGAGTAGATGA 1494 0.411 MERQRSFSFKPTRLLVFSFTIFSSVLFLSTFTTWLTNYTPSIHQHIHLYFNTSTSSSVGDSVVLPPLTGHSLTKNFTVISVVKVPTLIDNRLARTQKSISGFKSEPVRHHVGASNANFTSMQEYGTSPERVPSKEEKKVVAGGLVGKTQVPILKKIEQKGVEGCDLTKGYWVFDESYPPYSKDSCPFIDEGFDCEGNGRLDRSYTKWRWQAKGCDLPRFNATKMLELIRGKRLVFVGDSINRNQWESMLCMLLGAIKDPTRVYETHGRKITKEKGNYSFRFLDYQCTIEYYVSHFLVHESKARIGQKRRPTLRIDAIDHGSSRWRGADIVVFNTAHWWSHSKTQAGIYYYQEGSVVHPQLNVSTAFRRALKTWASWVDKRINHRKTRIFFRSSAPSHFRGGDWNSGGHCTEATLPLNETLSTNYPEKNIIVEEVIKQMKTPVTLLNITSLSAYRIDGHPSIYGRKTRSSRIQDCSHWCLPGVPDTWNELLYFHLQSR* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1822 497 Pfam PMR5 N terminal Domain 163 215 IPR025846 -
Gso19g1822 497 PANTHER - 114 496 IPR029965 -
Gso19g1822 497 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 114 496 IPR029962 GO:0016413
Gso19g1822 497 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 216 491 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1822 Gso-Chr19 46953930 46956856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1822 - - gmx:100819457 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1822 19 46953930 46956856 Gso3g1858 3 44171747 44174708 GST