Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1845 ATGGATGCTCTGTGTTTACACAGTAGCATTTGTGGGATAGCTCCGTCTCCGTCCATTCTCATTACTGCAACTGCACGCGCCAATGATTACGCGTCACTCTCTCAGGTGAAAGCGGTGGGGAGCTCCTCCTTGTTTTCCATATTCTCTTTTAGATACCCTTTGAAGTCCTTTTGGCCACGACCAACGGGGAATGCCACCGGCTACAACGACGCCGTTTTGGCAGAGAATGCAACGGCCGAGACAGAACAACCAGAAGGCGAAGGAGAGGGACAAAATGGGAACTGGGTTTTTAAGATTTTTCATATAAGGTCTGTTTGGAGAGGGGAACAGAGGAGCGATGATAACGATGAAGAGGAAGCTGTAACCAATGGTCAAACGGATGAAGAGGAAGAAGAGTGTGATGATTGTAGGGTTGATTATGATGATGACGAAGAAGAAGAAGAAAATGAAGAGGTTTCGTTCGATAGAGACTCGTTTTCAAGAATGCTTCGGAGGGTGTCATTGTCCGAAGCTAGATTCTATGCGCGCATATCCCACTTGGGCAATTTGGCATACTGTATTCCCAAAATCAAACCAGGGAAACTCTTCAAACACTATGGTCTGCGTTTTGTAACTTCATCCATAGAGAAAAAGGAATTAGCTATGGCAGCTGAAAAAAATCAGATATCTCAAAAAGAAGAAACTAATGAGAAGGATGTGGATGAAACAAAAGAGGAAAAGAATAATGGTGGATACATGATAAGTGCATCTGCTGTATACGAGATTGCTGCTTCTGCTGCCTCTTATCTTCATGCTCAGACAAGGAGCATACTTTCATTAACATCTTCTGATGCTGCGGAAGGTGAAGGCTCAATTGAAGCAATCAATGAAAGCTTTAACGGCGATAAGATGAGAAACACGGAGGAGGCAAATTTGAAGGCAACTACGGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGCAAGTAAAGCAGGCTTTTGCAGATGATTTGAACTCAACAAGCTCTTCACCTTGTGAATGGTTCGTATGTGATGATGACCAGACCTCTACAAGATATTTTGTGATCCAGGGCTCCGAGTCGTTTGCATCGTGGCAAGCAAATCTACTATTTGAGCCAGTTCAATTTGAGGGGTTAGACGTCCATGTACATAGAGGTATATACGAGGCTGCAAAAGGGACATATCAACAGATGTTGCCAGAAATTCGTGCTCACCTAAAATCTCATGGTTCACGTGCAACTTTCCGTTTCACTGGTCATTCTCTTGGGGGGAGCTTGGCATTACTTGTAAATCTTATGCTACCGATAAGGAAGGAAGCGCTATTCTCCTCTCTGCTTCCTGTCATAACCTTTGGGGCACCATCCATCATGTGTGGAGGTGACACTCTACTTGACATGCTTGGATTGCCACGGAGCCATGTTCAGGCAATCACATTGCACAGAGATATAGTACCACGAGCATTTTCTTGCCAGTACCCTAACCATCTTGTAGAATTACTAAAGGCTGTTAATGGTAACTTCCGCAATCATCCTTGCCTTAATAACCAGAAGCTATTATATGCACCGATGGGAGAACTGCTGATCCTCCAGCCAGATGAGAATTTTTCACCAAGTCATCATCTCCTGCCCTCAGGCAGTGGACTATATATTTTGAGTGGTTCTTTATCAGAATCTAGTGACACATTAAAACAAATTTACAAAGCTCAAATGGTTTTCTTGAACACACCACACCCACTTGAGATATTAAGTGATCGATCTGCCTATGGATTTGGAGGAACCATTCAGAGAGATCATGACATGAATTCCTACTTAAAATGTGTGAGAACCGTGATTCGCCAAGAACTTAACCAGATTCGCAAGGCAAGGAGAGAGCAAAGGCAAAAGGTGTGGTGGCCTCTCGTACTGCCACGTGGAAGTGACACTAACATAGTTGGGGGGTCCATGATTCAAGACCAGCCTTCCTTCTCTGGCATCATTCAGATAGGTAGAGAGTCATTGAAAAGGTTTAGTAGGCTTGTTAGATCCCAACACATGCAATTGTTCGTAGCGCTCCTGTTTCCTGCACGGTTGTTGCTCGTGGGAGCATGTAACTTAATTAGCTTAAGATGA 2106 0.4397 MDALCLHSSICGIAPSPSILITATARANDYASLSQVKAVGSSSLFSIFSFRYPLKSFWPRPTGNATGYNDAVLAENATAETEQPEGEGEGQNGNWVFKIFHIRSVWRGEQRSDDNDEEEAVTNGQTDEEEEECDDCRVDYDDDEEEEENEEVSFDRDSFSRMLRRVSLSEARFYARISHLGNLAYCIPKIKPGKLFKHYGLRFVTSSIEKKELAMAAEKNQISQKEETNEKDVDETKEEKNNGGYMISASAVYEIAASAASYLHAQTRSILSLTSSDAAEGEGSIEAINESFNGDKMRNTEEANLKATTDSVTAVVAANEQVKQAFADDLNSTSSSPCEWFVCDDDQTSTRYFVIQGSESFASWQANLLFEPVQFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLKSHGSRATFRFTGHSLGGSLALLVNLMLPIRKEALFSSLLPVITFGAPSIMCGGDTLLDMLGLPRSHVQAITLHRDIVPRAFSCQYPNHLVELLKAVNGNFRNHPCLNNQKLLYAPMGELLILQPDENFSPSHHLLPSGSGLYILSGSLSESSDTLKQIYKAQMVFLNTPHPLEILSDRSAYGFGGTIQRDHDMNSYLKCVRTVIRQELNQIRKARREQRQKVWWPLVLPRGSDTNIVGGSMIQDQPSFSGIIQIGRESLKRFSRLVRSQHMQLFVALLFPARLLLVGACNLISLR* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1845 701 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 34 697 - -
Gso3g1845 701 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 34 697 IPR043367 GO:0008970
Gso3g1845 701 MobiDBLite consensus disorder prediction 223 239 - -
Gso3g1845 701 SUPERFAMILY alpha/beta-Hydrolases 335 528 IPR029058 -
Gso3g1845 701 Coils Coil 208 239 - -
Gso3g1845 701 Pfam Lipase (class 3) 353 490 IPR002921 GO:0006629
Gso3g1845 701 Coils Coil 603 623 - -
Gso3g1845 701 Gene3D alpha/beta hydrolase 294 522 IPR029058 -
Gso3g1845 701 MobiDBLite consensus disorder prediction 109 135 - -
Gso3g1845 701 CDD Lipase_3 307 485 - -
Gso3g1845 701 MobiDBLite consensus disorder prediction 219 239 - -
Gso3g1845 701 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1845 Gso-Chr3 44058186 44061925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1845 1 701 Acyl Lipid Metabolism Gene Families AT1G02660 53.908 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1845 - - gmx:100788786 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1845 3 44058186 44061925 Gso10g0127 10 1330128 1334077 PCT
Gso10g0127 10 1330128 1334077 Gso3g1845 3 44058186 44061925 PCT