Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0127 ATGGAAACTGTGTGTTTAAAATCTGGGATGGTTCCCACGATCTCTATTAGTGGGTCGCTGGATGCACGTGCCAATCCTTCTCAGGTGAGCACGGTGGGGCGCGCCGCCGCGGATAAACCGCCGCAGAGGTCGGTGTTTTCGAGGTTTTCCTTTTGGTACCCTTTGGAATCTCTCTGGCCTCGGGGGAACAACAGCAGGTACAAAGGGCTGGCCCTCGACGACGCCGTTTTGGCGGACAACAACGCCGAAGCGAAGGCCGTTAGAGATGGCGGCCAGGGTGACGGAACGGAAAGGCAGACCGGAAACTGGGTTATGAAGATTCTGCATGTGAAGTCCGTGTGGGAAGGGAAACAGCGCAATGAAGAGGATGGTACGGTTCATGATCAAACTCAAACCAATTTCGACGAGGAGGAGGTGTGTGAATGTGATGCTTGCGGGGTTGATGAAGATGACGGCTACTGTGAAGAAGAAGAGGCTAAATTCGATAGAGGCTCGTTTTCGAGAATGCTTCGGAGGGTATCGTTAGGCGAAGCTAGATTGTACGCTCAGATGTCACACTTGGGGAACTTGGCTTACGATATACCTAGAATCAAGCCAGGGAAACTCTTGAAACATCATGGTCTGCGCTTTGTAACTTCATCGATAGAGAAGAAGGAATTGGCAGTGGCAGCAACAGCTGAAAAGGATCCCCAGAAAGTTGGATCTTCAATAGAGAAGAAGGAATTTGCAGCAATTGCTGAAAAGGATCCCCAGAAAGTTGGATCTTCAACAGAGAAGAAGGAATTTGCAGCAATTGCTGAAAAGGATCCCCAGAAAGTTGAAACTGATGAGAAGGTAGAAGAAAAAGAAGAAACAAAGGATCCAAAGAATGCTGGATACAAGATAAGTGCAACTGCTGCTTATAATATTGCTGCCTCTGCTGCCACTTATCTGCATTCTCAGACTAGTAGCATATTTCCATTCAAATCCTCAAATGCTGTGACTGGTGAAGGTTCACTTGAAGGAAGCAATGAAAGCCTTGACACTGTTAACATGCTAAACACAGAGGTGGCATCTTTGATGGCAACTACTGATTCAGTGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTGAACTCTGCACATTCAACACCCTGTGAATGGTTTGTCTGTGATGATGACCAGAGTGCTACAAGGTTTTTCGTTATTCAGGGTTCTGAGACGTTGGCTTCATGGCAAGCAAACCTACTCTTTGAGCCAATTAAATTTGAGGGTTTAGATGTACTTGTGCACAGAGGTATATATGAGGCTGCTAAAGGGATATATCAACAGATGTTGCCAGAAGTACGTGCTCACCTAAAATCTCGAGGTTCTCGTGCAACTTTTCGTTTCACAGGCCATTCTCTTGGTGGAAGCTTGGCATTACTTGTGAATCTCATGCTATTGATAAGGAATGAAGTGCCGGTCTCCTCTCTACTTCCTGTGATAACATTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGCTAAAAAAATTAGGTTTGCCTAGGAGCCATGTTCAAGCAATCACAATGCACAGAGACATAGTACCACGAGCATTTTCTTGCAATTACCCTAATCATGTTGCAGAACTATTGAAGGCTGTCAATGGGAACTTCCGTAGTCATCCTTGTCTCAATAAACAGAAGCTACTATATGCACCAATGGGTAATCTGCTGATTCTGCAGCCAGATGAGAAATTTTCACCAAGCCATCATCTCCTACCATCTGGCAGTGGTCTATATCTTTTGTGTTGTCCATTATCAGAATCCGATGACACAGAGAAGCGGCTCCGAGCTGCTCAGATGGTCTTCTTAAACTCACCTCATCCACTTGAGATATTAAGTGACCGATCTGCTTATGGATCTGGAGGAAGTATACAACGAGATCATGACATGAACTCTTACTTAAAGTCTTTGAGAACTGTGATTCGCAAAGAACTTAACCAGATCCGTAAAGCTAAGAGGGAGCAACGGCGTAAGGTGTGGTGGCCTCTTCTGTTATCTCGTGGAGCTGATACCAGCATTGTTGCTGGGAGGTCCATGATATCAATCAATGTGGGTCAACGCCAGTCACCCTTCTCCAGCGTGATACAAACAGGGAGAGAGTCCCTGAAAAGGTTCAGTAGGATTGTTACATCCCAACATATGCATTTGTTTGTGTTGCTTTTGTTCCCTGCTCGGTTGTTGCTCTTGGGAACATATAGCGTAATTAACCTCAAATGA 2268 0.4572 METVCLKSGMVPTISISGSLDARANPSQVSTVGRAAADKPPQRSVFSRFSFWYPLESLWPRGNNSRYKGLALDDAVLADNNAEAKAVRDGGQGDGTERQTGNWVMKILHVKSVWEGKQRNEEDGTVHDQTQTNFDEEEVCECDACGVDEDDGYCEEEEAKFDRGSFSRMLRRVSLGEARLYAQMSHLGNLAYDIPRIKPGKLLKHHGLRFVTSSIEKKELAVAATAEKDPQKVGSSIEKKEFAAIAEKDPQKVGSSTEKKEFAAIAEKDPQKVETDEKVEEKEETKDPKNAGYKISATAAYNIAASAATYLHSQTSSIFPFKSSNAVTGEGSLEGSNESLDTVNMLNTEVASLMATTDSVTAVVAAKEEVKQAVADDLNSAHSTPCEWFVCDDDQSATRFFVIQGSETLASWQANLLFEPIKFEGLDVLVHRGIYEAAKGIYQQMLPEVRAHLKSRGSRATFRFTGHSLGGSLALLVNLMLLIRNEVPVSSLLPVITFGSPSIMCGGDSLLKKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNGNFRSHPCLNKQKLLYAPMGNLLILQPDEKFSPSHHLLPSGSGLYLLCCPLSESDDTEKRLRAAQMVFLNSPHPLEILSDRSAYGSGGSIQRDHDMNSYLKSLRTVIRKELNQIRKAKREQRRKVWWPLLLSRGADTSIVAGRSMISINVGQRQSPFSSVIQTGRESLKRFSRIVTSQHMHLFVLLLFPARLLLLGTYSVINLK* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0127 755 MobiDBLite consensus disorder prediction 248 289 - -
Gso10g0127 755 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 32 752 - -
Gso10g0127 755 Coils Coil 651 671 - -
Gso10g0127 755 Gene3D alpha/beta hydrolase 341 569 IPR029058 -
Gso10g0127 755 SUPERFAMILY alpha/beta-Hydrolases 382 570 IPR029058 -
Gso10g0127 755 CDD Lipase_3 384 540 - -
Gso10g0127 755 Pfam Lipase (class 3) 401 538 IPR002921 GO:0006629
Gso10g0127 755 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 32 752 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0127 Gso-Chr10 1330128 1334077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0127 1 755 Acyl Lipid Metabolism Gene Families AT1G02660 53.668 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0127 - - gmx:100786628 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1845 3 44058186 44061925 Gso10g0127 10 1330128 1334077 PCT
Gso10g0127 10 1330128 1334077 Gso3g1845 3 44058186 44061925 PCT