Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1842 ATGGAAACCCAACCTGAATGCGCTGTCATCAACATTCCAAACATAATAAAAACAGAACAAGAAGCAAAACCCCTTCAACAACATGCGTCCGAGTCCCCAAAGAACAAGAGCGGTGGTGGCATGCGCTTTCTTAGGGTTGCACTCTTCAAGATGCGAGGGCGTTCCGCAAAACCAACCATGGCGCTTCAGGTAAATAATAATAATGACGATATTGATGACGGGTCCAAGAGCACATGGGGGAGGTTTGTGGGTTCCATGAGGCCATTGCACCTTCAAAGCACCCAATCTCCACGCTCATCACCTGATTTGCCATCTTCTGAATATAAAAAGGATTGTGGCGGTTATGTTTCTGATTTTGTGGCGGATGAGCAGGAGCCTTATTCGCCTTCCCCACCTATTAGCTGTTACGCTTCAGCCGTTGGGTTGAGCGAGCTTGTTCAAAATGATGAGGAAAATGAGTATAAGCAGGAGGTGATTGTGGAGGACTCCCACGTTGATGGAGATGGAGATTGGATGATTGATGCCAAGGCTGAGGATTTCATTGCTCAGTTCTACCAAGAAATGAAGTTGCAACGTTTAGATTCCGTGGATCGCCGTTACGTCGAGAGAAGCCAAAGGTCATTGGGTTGGTGA 633 0.4708 METQPECAVINIPNIIKTEQEAKPLQQHASESPKNKSGGGMRFLRVALFKMRGRSAKPTMALQVNNNNDDIDDGSKSTWGRFVGSMRPLHLQSTQSPRSSPDLPSSEYKKDCGGYVSDFVADEQEPYSPSPPISCYASAVGLSELVQNDEENEYKQEVIVEDSHVDGDGDWMIDAKAEDFIAQFYQEMKLQRLDSVDRRYVERSQRSLGW* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1842 210 MobiDBLite consensus disorder prediction 86 107 - -
Gso3g1842 210 MobiDBLite consensus disorder prediction 88 103 - -
Gso3g1842 210 PANTHER COTTON FIBER PROTEIN 1 205 - -
Gso3g1842 210 MobiDBLite consensus disorder prediction 19 40 - -
Gso3g1842 210 PANTHER COTTON FIBER PROTEIN 1 205 - -
Gso3g1842 210 MobiDBLite consensus disorder prediction 20 34 - -
Gso3g1842 210 Pfam Cotton fibre expressed protein 172 205 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1842 Gso-Chr3 44039611 44040734 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1842 - - gmx:102662079 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1807 19 46791957 46793249 Gso3g1842 3 44039611 44040734 GST
Gso3g1842 3 44039611 44040734 Gso2g0126 2 1295874 1297066 PCT
Gso3g1842 3 44039611 44040734 Gso10g0135 10 1383708 1385035 PCT
Gso2g0126 2 1295874 1297066 Gso3g1842 3 44039611 44040734 PCT
Gso10g0135 10 1383708 1385035 Gso3g1842 3 44039611 44040734 PCT