Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1807 ATGTCCTCGATCATGGAAACACAACCTGAATGCGCTGTCATCAACATCCCAAACATAAAAACAGAGCAACATGTGTCCGTGTCCCCAAAGAAGAAGAACGGTGGCGGCATGCGCTTTCTCAGGGTGGCACTCTTCAAGATGCGAGGGCGTTCCGCAAAACCAACCGCGCTTCAGGTGGATAATAATGAGGATGGTGAGAGGTCCAAGAGCACTTGGGGGAAGTTTGTGGGGTCCATGAGGCCATTGCACCTTCAAAGCACCCAATCTCCACGCTCATCACCTGATTCTCCATCTGAATATAAATCGGATTGCGGCGGCTATGTTTCTGATTTTGGGGCGGAGGAGGAGCCTTATTCGCCTTCCCCACCTAGTAGCCGTTACGCTTCAGCCGTAGGGTTGAACGAACTCGTTCAAAATGACGAGGAAAATGAGAAGCAAGAGGTGATTGTGGAGGACTACGAGCAACACGTTGATGGAGACGGGGATGAGATGATTGATGCCAAGGCTGAGGATTTCATTGCTCAGTTCTACCAAGAAATGAAGCTGCAACGTTTGGATTCCGTGGATCGTCGTTACGTTGAGCGAAGCCAAAGGTCATTGGGTTTGTGA 609 0.5008 MSSIMETQPECAVINIPNIKTEQHVSVSPKKKNGGGMRFLRVALFKMRGRSAKPTALQVDNNEDGERSKSTWGKFVGSMRPLHLQSTQSPRSSPDSPSEYKSDCGGYVSDFGAEEEPYSPSPPSSRYASAVGLNELVQNDEENEKQEVIVEDYEQHVDGDGDEMIDAKAEDFIAQFYQEMKLQRLDSVDRRYVERSQRSLGL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1807 202 MobiDBLite consensus disorder prediction 81 99 - -
Gso19g1807 202 Pfam Cotton fibre expressed protein 162 197 IPR008480 -
Gso19g1807 202 MobiDBLite consensus disorder prediction 51 127 - -
Gso19g1807 202 PANTHER COTTON FIBER PROTEIN 5 197 - -
Gso19g1807 202 PANTHER COTTON FIBER PROTEIN 5 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1807 Gso-Chr19 46791957 46793249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1807 - - gmx:102662079 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1807 19 46791957 46793249 Gso3g1842 3 44039611 44040734 GST
Gso19g1807 19 46791957 46793249 Gso2g0126 2 1295874 1297066 PCT
Gso19g1807 19 46791957 46793249 Gso10g0135 10 1383708 1385035 PCT
Gso2g0126 2 1295874 1297066 Gso19g1807 19 46791957 46793249 PCT
Gso10g0135 10 1383708 1385035 Gso19g1807 19 46791957 46793249 PCT