Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1835 ATGGTGAATACGGCGTCGTCCCCTTCTTCCTCTCCGGTGACCATTACAGTGTCGTCCGGAGGACGACGCCGCAGCATGGGTCTAACCAGTCCTGTTCCACGCGCCTCCGTCTCCGCCAACAACCCCGCTTCCCCTCTCAGGGTTTCCGGCGGCCGCGGCGGCGGCGCGTCTAAAGACGGCGGCATCGAAGAAACCAACACCGAATACGTGTCGTACACAGTCCACATCCCTCCGACGCCGGACCGCAGGCCGCTGACAGCCTCGGAGGACGGTGGAAAGAACAGCACGAGCTTCATCTCCGGCACGATCTTCACAGGAGGGTACAACTCCGTGACGCGCGGCCACGTCATGGAGTGCTCGATGGACAGCGATGCGCAGGCGAAAACGACATCGTTGACGGTTTGCGGAATGATGGGCTGTGACGAGGAAGCGATGAAAGGAAGGCTGTGTGGTGGTGGACCGTGCGAGTGCGGGTTCAAGATCTGCAGAGAGTGTTACTCGGAGTGTGGAGGGAAGTGCCCTGGCTGCAAAGCGCCTTATAAGTATGTGAGCGATGATGATGAGGAAGAAGAAGACGACGTTGAGGGGTCTGAGGGTGAGGATCAGCCTCTGCCTTTGCCTTCGATGGCTGAGTTTAAGTTGGATAAGAGGCTTTCTGTTGTGAAATCGTTCAAGACGCAGAACCATCCTCCTGATTTTGACCACACGAGGTGGCTATTTGAGACCAAGGGGACCTATGGCTATGGAAACGCTGTGTGGCCTAAAGATGGGTGTGGTGCTAATGGGTTTGAACCCCCTCCGGAGTTTGGAGAGAAGGCGAGGAGACCCTTGACTAGGAAGGTTGGAGTTTCAGCTGCTATTATCAGTCCTTATAGGTTGCTTATTCTGCTGCGTCTTGTTGCCTTGGGTTTATTTCTTACGTGGAGGGTTAGACACCCCAACCATGAAGCGATTTGGCTGTGGGCTATGTCCATAACTTGCGAGCTATGGTTTGCATTTTCTTGGATTCTTGATCAGCTTCCTAAGCTCTGTCCAGTGAACAGAGTCACTGATCTCTCTGTTCTGAAAGAGCGGTTTGAGTCTCCGAACCTGCGAAACCCGAAAGGGAGGTCTGATCTACCAGGAATTGACGTGTTTGTTTCCACAGCAGACCCTGAAAAGGAACCTCCTCTTGTAACCGCCAACACCATTCTCTCGATCCTTGCAGTTGATTATCCAGTGGAGAAGGTTGCGTGTTACTTGTCTGATGATGGTGGAGCTCTGTTGACATTTGAAGCTCTTGCTGAGACTGCTAGCTTTGCTAGAATTTGGGTTCCTTTCTGTCGGAAGCATCACATAGAGCCGCGAAATCCTGAAACGTATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTCCGGTTGGACTTTGTGAGAGAGAGGAGAAGGGTGAAGAGGGAATATGATGAGTTCAAAGTGAGGATAAACTCATTGCCTGAATCCATAAGGAGAAGGTCTGATGCTTACAATGCTCACGAGGAGTTGCGAGCTAAGAAGAAACAGATGGAAGCAGGTTCCAATGTCTCTGAACCTATTAAGGTTCCTAAAGCTACATGGATGTCCGATGGTTCTCATTGGCCAGGAACTTGGGCATCGGGTGATCAAGACCACTCAAGAGGGGACCATGCTGGTATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTGGTGCAGAAGCTGATGGGGATAACTTGATTGACACAACAGATGTTGATATTAGGCTTCCCATGCTTGTTTATGTGTCTCGTGAGAAGAGGCCAGGATATGATCACAACAAGAAAGCAGGAGCAATGAATGCTCTTGTTCGGACCAGTGCCATCATGTCCAATGGACCATTCATTCTGAATCTTGACTGTGATCACTACATCTACAACTCCTTGGCTATGAGAGAAGGTATGTGCTTTATGCTTGACAGGGGTGGTGATAGGATATGCTACGTTCAGTTCCCTCAAAGATTTGAGGGCATCGACCCCAGTGACAGATATGCAAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGCTTACAAGGCCCCATGTACGTGGGAACGGGTTGCATATTCCGAAGAACAGCTCTTTATGGATTTAGTCCTCCAAGAGCCACAGAACACCATGGCTGGTTAGGCAGGAGGAAAATCAAGTTGTTTTTGAGAAAGCCAAAGGTGTCAAAAAAGGAAGAGGATGAAATTTGTGTGCCAATAAATGGTGGTTACAATGACGATGATGCAGACATAGAGTCCTTGCTTCTTCCCAGAAGGTTCGGGAACTCTACTTCTCTTGCTGCATCCATTCCTGTGGCGGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACAAGGAAGGCCAGCAGGTTCTCTTGCCGTGCCTCGCGAGCCATTGGATGCAGCCACTGTTGCTGAGGCAATAAGTGTGATATCTTGTTTCTACGAGGATAAAACTGAATGGGGCAAACGAGTGGGGTGGATATATGGTTCAGTTACAGAAGATGTGGTCACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTACTGTGTGACCCAAAGGGATGCTTTCAGAGGAACAGCTCCAATCAACTTGACAGATAGGCTCCACCAAGTGCTTCGATGGGCAACAGGTTCTGTTGAGATTTTCTTGTCAAGGAACAATGCATTGTTGGCAAGTCCTAGAATGAAGTTCCTGCAGAGGGTGGCATATTTCAACGTGGGAATGTACCCTTTCACTTCAATCTTTCTGATTGTCTATTGCTTTCTACCAGCAGTGTCCCTATTTTCGGGGCAGTTTATAGTCCAGTCCCTTAGTGCAACCTTTCTAGTCTTCTTGCTTGGCATCACAATCACACTGTGCTTGCTTGCACTCCTCGAGATCAAGTGGTCAGGAATCACTCTACATGATTGGTGGCGAAATGAGCAGTTCTGGTTGATTGGTGGAACAAGTGCACACCCTGCTGCTGTTTTACAAGGGTTGTTGAAGGTCATAGCAGGAGTGGACATATCATTCACTTTGACCTCAAAGTCAGCCACCCCAGAAGATGGAGATGATGAGTTTGCTGATCTTTATGAGGTGAAGTGGAGCTTTTTAATGGTCCCTCCAATCACTATTATGATGGTGAATTCCATTGCTATTGCTGTGGGGGTAGCCAGGACTTTGTACAGTCCATTTCCACAATGGAGCAGACTAGTAGGAGGGGTGTTTTTCAGCTTCTGGGTTTTGTGCCATCTTTACCCCTTTGCAAAGGGCCTCATGGGAAGGAGAGGGAAGGTTCCTACCATCATCTATGTTTGGTCTGGATTGCTCTCCATTATTATCTCTTTGCTTTGGGTGTACATAAACCCTCCTTCAGGAAGAACACAAGATTACATGAATTTCCAATTCCCTTGA 3456 0.487 MVNTASSPSSSPVTITVSSGGRRRSMGLTSPVPRASVSANNPASPLRVSGGRGGGASKDGGIEETNTEYVSYTVHIPPTPDRRPLTASEDGGKNSTSFISGTIFTGGYNSVTRGHVMECSMDSDAQAKTTSLTVCGMMGCDEEAMKGRLCGGGPCECGFKICRECYSECGGKCPGCKAPYKYVSDDDEEEEDDVEGSEGEDQPLPLPSMAEFKLDKRLSVVKSFKTQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGCGANGFEPPPEFGEKARRPLTRKVGVSAAIISPYRLLILLRLVALGLFLTWRVRHPNHEAIWLWAMSITCELWFAFSWILDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHHIEPRNPETYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEAGSNVSEPIKVPKATWMSDGSHWPGTWASGDQDHSRGDHAGIIQAMLAPPNAEPEFGAEADGDNLIDTTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLAMREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWLGRRKIKLFLRKPKVSKKEEDEICVPINGGYNDDDADIESLLLPRRFGNSTSLAASIPVAEYQGRLLQDLQGKGTQGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTQRDAFRGTAPINLTDRLHQVLRWATGSVEIFLSRNNALLASPRMKFLQRVAYFNVGMYPFTSIFLIVYCFLPAVSLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITIMMVNSIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISLLWVYINPPSGRTQDYMNFQFP* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1835 1151 MobiDBLite consensus disorder prediction 1 94 - -
Gso3g1835 1151 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 583 725 IPR029044 -
Gso3g1835 1151 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 54 1148 - -
Gso3g1835 1151 Pfam Cellulose synthase 376 1143 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso3g1835 1151 MobiDBLite consensus disorder prediction 187 206 - -
Gso3g1835 1151 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 54 1148 - -
Gso3g1835 1151 SUPERFAMILY Nucleotide-diphospho-sugar transferases 391 944 IPR029044 -
Gso3g1835 1151 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1835 Gso-Chr3 43988449 43993098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1835 47 1151 Glycosyltransferase AT3G03050 66.815 0.0 1526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1835 K00770 - gmx:100797597 2305.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1801 19 46748922 46753263 Gso3g1835 3 43988449 43993098 GST