Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1801 ATGGTGAAAACGGCATCGCCCTCTTCTTCTTCTCCGGTGACCATAACGGTGTCGTCCGGAGGACGACGCCGCAGCATGGGCCTAACCAGTCCTATTCCACGCGCCTCCGTCTCCGCCAACAACCCCGCTTCCCCTCTCAGAGCTTCCGGCTGCGGCGGAAGGCGGATCTCCGGCGGCGGAGCGTCCAAAGACGGCGGCATCGAAGAAAGCAACACCGAATTCGTGTCGTACACCGTCCATATCCCTCCGACGCCGGACCGCAGGCCGCTGACGGCATCGGAGGACGGAAAGAGCGGCACGAGCTTCATCTCCGGCACGATCTTCACGGGAGGGTACAACTCCGTGACGCGCGGCCACGTCATGGAGTGCTCGATGGAGAGCGACGCGCAGGCGAAAACGTCGTCGTCGGTTTGCGGAATGAAGGGCTGCGACGAAGAAGCGATAAAGGGAAGGCTGTGTGGTGGGCCGTGCGAGTGCGGGTTCAAGATCTGCAGAGACTGCTACTTGGAGTGTGGTGGGAAGAACGGTGGAGGAAAGTGTCCTGGGTGCAAAGAGCCCTATAAGTATGTGAGTGATGATGATGAAGATGATGAGGAAGAGGACGAGGACCAGCCTCTTCCTCTGCCTTCCATGGCGGAGTTTAAGTTGGATAAGAGGCTTTCTGTTGTGAAGTCGTTCAAGGCGCAGAATCATCCTCCTGACTTTGACCACACGAGATGGCTATTTGAGACGAAGGGAACTTATGGCTATGGAAACGCCGTGTGGCCTAAAGATGGGTATGGTCCTAACGGGTTCGATCCCCCTCCGGAGTTTGGAGAGAAGGCTAGAAGACCTTTGACTAGGAAGGTTGGAGTTTCAGCTGCTATTATCAGCCCTTATAGGTTGCTTATTCTGCTGCGTCTTGCTGCCTTGGGTTTATTTCTTACGTGGAGGGTTAGACACCCAAACCATGAAGCGATTTGGCTATGGGCTATGTCAATTACCTGTGAGCTTTGGTTTGCATTTTCGTGGATTCTTGATCAGCTTCCTAAGCTCTGTCCTGTGAACAGAGTCACTGATCTCTCTATTCTGAAAGGGCGGTTTGAGTCTCCAAACCTGCGAAACCCGAAAGGGAGGTCTGATCTTCCAGGAATTGACGTGTTTGTTTCCACGGCAGACCCTGAAAAGGAACCTCCTCTTGTCACCGCCAACACCATTCTCTCGATCCTTGCAATTGATTATCCAGTGGAGAAGGTCGCGTGTTACTTGTCTGATGATGGTGGAGCTTTGTTGACATTTGAAGCCCTTGCTGAGACTGCTAGCTTTGCTAGAATTTGGGTTCCTTTCTGTAGAAAGCACCACATAGAGCCGCGAAACCCTGAAGCATATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTCCGGTTGGACTTTGTGAGAGAGAGGAGAAGGGTGAAGAGGGAGTATGATGAGTTCAAAGTGAGGATAAACTCCTTGCCTGAATCCATAAGGAGAAGATCTGATGCTTACAATGCTCATGAGGAGCTACGAGCCAAGAAGAAACAGATGGAAGCAGGTTCCAATGTCTCTGAACCCATTAAAGTTCCTAAAGCTACATGGATGTCTGATGGTTCTCATTGGCCAGGAACTTGGGCTTCAGCAGAACAAGACCACTCAAGAGGGGACCACGCTGGTATAATCCAGGCAATGTTAGCTCCACCAAATGCAGAACTAGAATTTGGTACAGAAACTGATGGGGAGAACTTGATTGGCACAACAGATGTTGATATTAGGCTTCCCATGCTTGTTTATGTGTCTCGTGAGAAGAGGCCGGGATATGATCACAACAAGAAAGCGGGAGCAATGAATGCTCTTGTTCGCACCAGCGCCATCATGTCCAATGGACCATTCATTCTGAATCTCGACTGCGATCACTACATCTACAACTCCTTGGCTATGAGGGAAGGCATGTGCTTTATGCTTGACAGGGGTGGTGATAGGATATGCTACGTTCAGTTCCCTCAAAGGTTTGAGGGCATTGACCCTAGTGACCGATACGCAAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGCTTGCAAGGCCCCATGTATGTGGGAACGGGTTGCATATTCAGAAGAACAGCTCTCTATGGATTTAGTCCTCCAAGAGCCACAGAACACCATGGTTGGTTAGGCAGGAGGAAAATCAAGTTATTTTTGAGAAAGCCAAAGGTGTCAAAAAAGGAGGTGGATGAAGTTTGTCTGCCAATAAATGGTGATCACAATGATGACGATGCAGACATAGAGTCCTTGCTTCTTCCCAGAAGGTTTGGCAACTCTACTTCTCTTGCTGCATCCATTCCTGTGGCGGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGAAAAGGGAACACAAGGAAGGTCAGCAGGTTCCCTTGTCGTGCCTCGCGAGCCATTGGATGCAGCCACTGTTGCTGAGGCAATAAGTGTGATATCTTGTTTCTATGAGGATAAAACTGAATGGGGCAAACGAGTGGGGTGGATATATGGTTCAGTTACAGAAGATGTTGTCACTGGTTATAGAATGCACAATAGAGGTTGGAGATCAGTGTACTGTGTGACCAAAAGGGATGCCTTTAGAGGAACAGCTCCAATCAATTTGACAGATAGGCTCCACCAAGTGCTTCGATGGGCAACAGGTTCTGTTGAGATTTTCTTCTCAAGGAACAATGCATTATTAGCAAGTCCTAGAATGAAGTTCCTGCAGAGGGTGGCATATTTCAATGTAGGAATGTACCCTTTCACTTCAATGTTTTTGATCGTCTATTGTTTTCTACCAGCAGTATCACTATTTTCGGGACAGTTTATAGTCCAATCCCTCAGTGCAACATTCCTAGTGTTCTTGCTGGGCATCACAATTACATTGTGCTTGCTTGCACTGCTAGAGATCAAGTGGTCAGGAATCACTCTACATGATTGGTGGCGAAATGAACAGTTCTGGTTGATTGGTGGAACAAGTGCTCACCCTGTTGCTGTTTTACAAGGATTGTTGAAGGTCATAGCAGGAGTGGACATATCATTCACTCTAACCTCAAAGTCAGCCACCCCAGAAGATGGAGATGATGAGTTTGCAGATCTTTATGAAGTGAAGTGGAGCTTTCTAATGGTCCCTCCAATCACTATTATGATGGTGAATTCCATTGCTATTGCTGTAGGGGTTGCCAGGACTTTGTACAGTCCATTTCCACAATGGAGCAGACTTGTAGGAGGGGTGTTTTTCAGCTTTTGGGTATTGTGCCATCTTTACCCCTTTGCAAAGGGTCTCATGGGAAGGAGAGGGAAGGTTCCTACCATCATCTATGTTTGGTCTGGATTGCTCTCCATCATTATCTCTTTGCTTTGGGTGTACATAAACCCTCCTTCAGGAAGAACTCAAGATTACATGAATTTTCAATTCCCTTAA 3462 0.4827 MVKTASPSSSSPVTITVSSGGRRRSMGLTSPIPRASVSANNPASPLRASGCGGRRISGGGASKDGGIEESNTEFVSYTVHIPPTPDRRPLTASEDGKSGTSFISGTIFTGGYNSVTRGHVMECSMESDAQAKTSSSVCGMKGCDEEAIKGRLCGGPCECGFKICRDCYLECGGKNGGGKCPGCKEPYKYVSDDDEDDEEEDEDQPLPLPSMAEFKLDKRLSVVKSFKAQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGYGPNGFDPPPEFGEKARRPLTRKVGVSAAIISPYRLLILLRLAALGLFLTWRVRHPNHEAIWLWAMSITCELWFAFSWILDQLPKLCPVNRVTDLSILKGRFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAIDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHHIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEAGSNVSEPIKVPKATWMSDGSHWPGTWASAEQDHSRGDHAGIIQAMLAPPNAELEFGTETDGENLIGTTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLAMREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWLGRRKIKLFLRKPKVSKKEVDEVCLPINGDHNDDDADIESLLLPRRFGNSTSLAASIPVAEYQGRLLQDLQEKGTQGRSAGSLVVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPAVSLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPVAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITIMMVNSIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISLLWVYINPPSGRTQDYMNFQFP* 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1801 1153 Pfam RING/Ubox like zinc-binding domain 154 188 - -
Gso19g1801 1153 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 587 727 IPR029044 -
Gso19g1801 1153 SUPERFAMILY Nucleotide-diphospho-sugar transferases 393 946 IPR029044 -
Gso19g1801 1153 MobiDBLite consensus disorder prediction 1 69 - -
Gso19g1801 1153 MobiDBLite consensus disorder prediction 79 98 - -
Gso19g1801 1153 Pfam Cellulose synthase 378 1145 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso19g1801 1153 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 85 1150 - -
Gso19g1801 1153 SUPERFAMILY RING/U-box 143 189 - -
Gso19g1801 1153 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 85 1150 - -
Gso19g1801 1153 MobiDBLite consensus disorder prediction 1 45 - -
Gso19g1801 1153 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 206 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1801 Gso-Chr19 46748922 46753263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1801 34 1153 Glycosyltransferase AT3G03050 65.679 0.0 1526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1801 K00770 - gmx:100804687 2297.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1801 19 46748922 46753263 Gso3g1835 3 43988449 43993098 GST