Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1813 ATGAAGTTGAGGTCTTCAATCGCATTTATTTGCATTCTGGCGAGTGTGAGTGTGACAATTTCAGAATCATTAAGCCAACAAGAGCAATTGTCAGCATATGAAGTTCTTGAGAAATACGATCTCCCAGTGGGGCTTCTTCCAAAAGGTGCCACAGGGTATGAGCTAAACGAAAAAAACGGGCACTTCACAGCGTATTTGAATGGAACATGCTACTTCAGCATAGAGTCGTATGAGCTAAAGTACAAGTCCACAATCAAGGGCGTGATCTCCAAGGGCAAGTTGTCGAAGCTGAAGGGTATTAGTGTGAAGATTGAAGTGTTGTGGCTCAAAATCGTGGAGGTCACTCGCGACGGCGATGACCTCCAATTCTCGGTGGGTGTTGCCTCTGCTGGCTTCAGCGTCGACAGCTTCTCAGAGAGCCCCCAGTGTGGGTGTGGATTCGATTGCAACTATTTCAATCAAAACGGTGATGTTTCTTCTCTTTAG 486 0.4609 MKLRSSIAFICILASVSVTISESLSQQEQLSAYEVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNGTCYFSIESYELKYKSTIKGVISKGKLSKLKGISVKIEVLWLKIVEVTRDGDDLQFSVGVASAGFSVDSFSESPQCGCGFDCNYFNQNGDVSSL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1813 161 PANTHER DUF538 FAMILY PROTEIN 12 156 - -
Gso3g1813 161 Pfam Protein of unknown function, DUF538 32 137 IPR007493 -
Gso3g1813 161 Gene3D - 14 143 IPR036758 -
Gso3g1813 161 SUPERFAMILY At5g01610-like 8 149 IPR036758 -
Gso3g1813 161 PANTHER T31J12.3 PROTEIN-RELATED 12 156 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1813 Gso-Chr3 43816186 43817102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1813 - - gmx:100527514 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1777 19 46566729 46567603 Gso3g1813 3 43816186 43817102 GST
Gso3g1813 3 43816186 43817102 Gso2g0146 2 1493923 1494813 PCT
Gso3g1813 3 43816186 43817102 Gso10g0152 10 1614053 1614961 PCT
Gso2g0146 2 1493923 1494813 Gso3g1813 3 43816186 43817102 PCT
Gso10g0152 10 1614053 1614961 Gso3g1813 3 43816186 43817102 PCT