Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1777 ATGAGGTCTTCAATCATATTTCTTTGCATTCTGGTGTATCTGAACGTGGTAGCTGCGGAATTGTCAGCTTACGACGTTCTTGAGAAATACGATCTCCCAGTTGGGCTTCTTCCAAAAGGTGCCACAGGGTATGAATTAAACGAAAAAAACGGGCACTTCACAGCGTATTTGAATGGAACATGCTACTTCAGCATAGAGTCGTATGAGCTAAAGTACAAGTCCACCATCAAGGGAGTGATCTCCAAGGGCAAGTTGTCGAAGCTGAAAGGTGTTAGTGTGAAGATTGAAGTGTTGTGGCTCAAAATCGTGGAGCTAACTCGCGACGGCGATGACCTCCAATTCTCGGTGGGTGTTGCCTCTGCTGGCTTCAGCGTCGACAGCTTCTCCGAGAGCCCCCAGTGTGGCTGTGGATTCGCTTGCGACAATTTCAATCAAAATGGTGATGTTTCTTCTCTTTAG 459 0.4684 MRSSIIFLCILVYLNVVAAELSAYDVLEKYDLPVGLLPKGATGYELNEKNGHFTAYLNGTCYFSIESYELKYKSTIKGVISKGKLSKLKGVSVKIEVLWLKIVELTRDGDDLQFSVGVASAGFSVDSFSESPQCGCGFACDNFNQNGDVSSL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1777 152 PANTHER T31J12.3 PROTEIN-RELATED 4 147 IPR007493 -
Gso19g1777 152 SUPERFAMILY At5g01610-like 10 140 IPR036758 -
Gso19g1777 152 PANTHER DUF538 FAMILY PROTEIN 4 147 - -
Gso19g1777 152 Pfam Protein of unknown function, DUF538 23 128 IPR007493 -
Gso19g1777 152 Gene3D - 11 134 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1777 Gso-Chr19 46566729 46567603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1777 - - gmx:100500136 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1777 19 46566729 46567603 Gso3g1813 3 43816186 43817102 GST
Gso19g1777 19 46566729 46567603 Gso2g0146 2 1493923 1494813 PCT
Gso19g1777 19 46566729 46567603 Gso10g0152 10 1614053 1614961 PCT
Gso2g0146 2 1493923 1494813 Gso19g1777 19 46566729 46567603 PCT
Gso10g0152 10 1614053 1614961 Gso19g1777 19 46566729 46567603 PCT