Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1809 ATGTCTTCGTCTTCTTCGGGCTTGATTTTCCGAGGGCACGAGGCCCATCCCATGGACGACGCCTATTACCCGAAGCCGCAGAAGCCATGGCTCTCCTTCGGCTACCTCCTCCGCGAACAGCGTCTCCACTTCCTCCTCCTCGGCTTTGTCCTCGCAACCCTCTTCTTCTTCCTCCTCCCATCATCGTCCCCTTCCCAACCCCTTGGAGCCCACGACCCATTCCCCACCCCTTACTTGGAGCCCACCCGCTGGCCCACCAACTCCCGAAGCTACGACGTCGTCTCCGTGCATTCCGTGGGAAAAATCCCTCTCGGGATTAAGCGGAAGGGGCTCCGGATCGTCGTCACCGGTGGGGCCGGCTTCGTCGGGTCTCACTTGGTGGATCGGTTGATTGCCCGAGGAGACAGCGTCATCGTCGTCGACAATTTTTTCACCGGAATGAAAGAAAACGTGATGCACCATTTTGGGAACCCCAACTTCGAGCTCATCCGACACGACGTCGTTGAGCCTCTCCTGTTAGAGGTCGACCAGATCTACCATCTCGCTTGCCCCGCATCCCCTGTCCATTACAAGTTTAATCCAGTCAAGACTATCAAGACCAACGTGGTCGGAACGCTGAACATGCTGGGACTTGCTAAAAGAGTGGGTGCTAGGTTCTTGTTAACCAGTACCAGTGAGATTTATGGTGATCCTCTGGAACACCCTCAGAAGGAAACCTATTGGGGCAACGTTAATCCCATTGGTGTTCGAAGCTGCTATGACGAGGGAAAGCGTACTGCTGAGACGTTGACCATGGATTACCACAGAGGAGCTGGAGTCGAGGTGAGAATAGCTAGGATTTTCAACACCTACGGGCCACGAATGTGCTTAGATGATGGTCGCGTCGTTAGTAACTTCGTCGCTCAGGCACTAAGGAAGGAGCCTTTGACCGTTTATGGGGATGGGAAGCAGACTAGGAGTTTTCAATATGTTTCTGATTTGGTGGAGGGGCTGATGCGCCTTATGGAAGGTGAACATGTTGGACCTTTCAATCTTGGAAATCCGGGTGAATTCACCATGCTTGAACTTGCCAAGGTGGTACAAGAAACAATAGATCCAGAGGCAAAGATAGAGTACAGGCCCAACACAGAGGATGACCCACACAAGAGAAAGCCTGATATTAGTAGGGCCAAGGAGCAACTGGGCTGGGAACCCAAGGTGGACCTACGGAAGGGACTCCCTCTAATGGTTTCTGACTTCCGACAACGCATTTTTGGGGACCAAAAGGAAGGAACAACCTCTGCCTAA 1287 0.5299 MSSSSSGLIFRGHEAHPMDDAYYPKPQKPWLSFGYLLREQRLHFLLLGFVLATLFFFLLPSSSPSQPLGAHDPFPTPYLEPTRWPTNSRSYDVVSVHSVGKIPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGMKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEIYGDPLEHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPEAKIEYRPNTEDDPHKRKPDISRAKEQLGWEPKVDLRKGLPLMVSDFRQRIFGDQKEGTTSA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1809 428 Gene3D - 107 230 - -
Gso3g1809 428 Gene3D - 231 418 - -
Gso3g1809 428 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 418 IPR036291 -
Gso3g1809 428 CDD UGD_SDR_e 112 414 - -
Gso3g1809 428 MobiDBLite consensus disorder prediction 367 394 - -
Gso3g1809 428 Pfam GDP-mannose 4,6 dehydratase 115 407 IPR016040 -
Gso3g1809 428 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 6 424 IPR044516 GO:0042732|GO:0048040|GO:0070403
Gso3g1809 428 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 6 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1809 Gso-Chr3 43782487 43786665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1809 108 410 Miscellaneous Gene Families AT1G02000 25.672 4.36e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1809 K08678 - gmx:100782935 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1773 19 46537587 46541923 Gso3g1809 3 43782487 43786665 GST