Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1773 ATGTCTTCGTCTACGGGCTTGATTTTCCGAGGGCACGAGGCCCAACCCATGGACGACGCCTATTACCCGAAGCCGCAGAAGCCATGGCTCTCCTTCCGCTACCTCCTACGCGAACAGCGTCTCCACTTCCTCCTCCTGGGCATTGTCCTCGCCACCCTCTTCTTCTTCCTCCTCCCCTCTGGCCTCCACGACCCATTCCCCACTCCTTACTTGGAGCCCACCCGCTGGCCCACCAACTCCCCAAGCTACGACGTCGTCTCCGTGCATTCCGTCGGAAAAATCCCTCTGGGGATTAAGCGGAAGGGTCTCCGGATCGTTGTGACCGGTGGGGCCGGGTTCGTCGGTTCCCACTTGGTGGATCGCTTGATTGCCCGCGGAGACAGCGTCATCGTCGTCGACAATTTCTTCACCGGAAGGAAAGAAAACGTCATGCACCATTTCGGCAACCCCAACTTCGAGCTCATTCGACACGACGTCGTTGAGCCTCTCCTGTTAGAGGTCGACCAGATCTACCATCTCGCCTGCCCCGCCTCCCCTGTCCATTACAAGTTTAACCCAGTCAAGACTATCAAGACCAACGTGGTGGGAACGTTGAACATGCTGGGACTGGCTAAAAGAGTGGGGGCCAGGTTCTTGCTGACCAGTACCAGTGAGGTTTACGGAGATCCTCTGGAACATCCTCAGAAGGAGACCTATTGGGGCAACGTTAATCCCATTGGTGTTCGAAGCTGCTATGATGAGGGAAAGCGTACTGCTGAGACGTTGACCATGGACTACCACAGAGGAGCTGGAGTCGAGGTGAGAATAGCTAGGATTTTCAACACCTACGGGCCACGAATGTGCTTAGATGATGGTCGCGTTGTTAGTAACTTCGTTGCTCAGGCACTGAGGAAGGAACCTTTGACCGTTTATGGGGATGGGAAGCAGACTAGGAGTTTCCAATATGTTTCTGACTTGGTGGAGGGGCTGATGCGCCTTATGGAAGGAGAACATGTGGGACCTTTCAATCTTGGAAATCCGGGTGAATTCACCATGCTTGAACTTGCCAAGGTGGTCCAAGAAACAATAGATCCAGAGGCTAAGATAGAGTACAGGCCCAACACTGAGGATGACCCGCACAAGAGAAAGCCTGATATTAGTAGGGCCAAGGAGCAACTGGGTTGGGAACCCAAGGTGGACCTACGCAAGGGACTCCCTCTAATGGTTTCTGACTTCCGACAACGCATTTTTGGGGACCAAAAGGAAGGAACAACCTCTGCCTAA 1263 0.5384 MSSSTGLIFRGHEAQPMDDAYYPKPQKPWLSFRYLLREQRLHFLLLGIVLATLFFFLLPSGLHDPFPTPYLEPTRWPTNSPSYDVVSVHSVGKIPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPEAKIEYRPNTEDDPHKRKPDISRAKEQLGWEPKVDLRKGLPLMVSDFRQRIFGDQKEGTTSA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1773 420 MobiDBLite consensus disorder prediction 359 386 - -
Gso19g1773 420 Pfam GDP-mannose 4,6 dehydratase 107 399 IPR016040 -
Gso19g1773 420 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 6 416 - -
Gso19g1773 420 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 6 416 IPR044516 GO:0042732|GO:0048040|GO:0070403
Gso19g1773 420 CDD UGD_SDR_e 104 406 - -
Gso19g1773 420 Gene3D - 99 225 - -
Gso19g1773 420 Gene3D - 226 410 - -
Gso19g1773 420 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 410 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1773 Gso-Chr19 46537587 46541923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1773 100 402 Miscellaneous Gene Families AT1G02000 25.970 1.19e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1773 K08678 - gmx:100809832 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1773 19 46537587 46541923 Gso3g1809 3 43782487 43786665 GST