Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1780 ATGCACTTGCTACTATCCAAGTCCCCACTATTACTGATACATAATTCTTCTATGCTCCTCCACCGCTTCTCTCCTCTTCTCCTTCCTCGTTTTCTCTTTCGCCAACCCCCCTTCCCCTCTTTGAATTTCAAACCTCTCACACTCAAGGTCCTCTCCATGGCATCGTCTCATTCCTCCCACCACATACACACTAATCGACTCGCTTCCGAACAGAGCCCCTATCTTCTCCAACACGCTCACAACCCTGTTGATTGGTATCCCTGGGGCGAAGAAGCCTTCGCCGAAGCGCGCCGGCGAGACGCGCCTATCTTCTTGTCAATTGGTTACAGCACTTGTCACTGGTGTCATGTTATGGAGGTCGAGTCTTTCGAGGATGAAGCGGTTGCCAAGTTGCTGAACGATTGGTTCGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTGTACATGTCGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTCCCCCCTGATGATAAGTATGGACGACCAGGATTTAAGACTATACTTAGAAAGGTAAAAGAAGCTTGGGATAGTAAGAGGGATATGCTAATTAAGAGTGGATCATATGCAATTGAACAGCTTTCTGAGGCAATGTCTGCTAGTTCAGATTCTGATAAACTGCCTGATGGGGTTCCAGCTGATGCGTTACGCCTATGCTCGGAGCAGCTCTCTGGGAGCTACGATTCAAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGCTATATCACTCCAAAAAGTTGGAGGATACGGGGAAGTTGGGTGTAGCTAATGGAAGCCAGCAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGTGGGATTCATGATCATATTGGAGGGGGATTTCACAGATACAGTGTGGATGAGTGCTGGCATGTTCCACATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCCAATGTTTATCTGGATGCGTTTTCTATCACAAAAGATACCTTTTATTCTTATATATCACGAGATATCCTTGATTATTTAAGGAGAGATATGATTGGTCCAGAAGGTGAAATTTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGACAAGCAAAGAGGTTGAAGACTTACTTGGAGAGCATGCTGCTCTTTTTGAGGAGCACTATTACATCAAGCAATTGGGTAACTGTGACCTATCTGGAATGAGTGATCCTCACGATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAGGAACCTTCAGAACTGGCATCAAAATATGGCATGTCAGTTGAGACATATCAAGAAATTCTTGGAGAATGCAGGCATAAGTTGTTTGAAGTAAGGTCAAGGCGTCCAAAGCCACATTTGGATGATAAGGTTATTGTATCGTGGAATGGACTGGCAATCTCATCTTTTGCCAGGGCTTCTAAGATTCTCAAGGGTGAAGCTGAAGGGACCAAATTCTACTTTCCTGTCATTGGCACTGAACCAAAGGAGTACATGGGAATTGCAGAAAAAGCAGCATCCTTTATTAGGAAGCAACTTTACAATGTAGAAACTCACAGGCTACACCATAGTTTCAGACATTCGCCATCTAAAGCTCCTGCTTTCTTGGATGATTATGCTTTTCTGATTTCTGGATTGCTGGATCTCTATGAGTTTGGTGGTGGAATTAGCTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCTTTGTTTCTTGATAAGACAGGAGGAGGATATTTCAATAATACAGGAGAAGATGCTTCCGTTCTCCTCCGTGTAAAGGAAGACCATGATGGGGCAGAACCCTCAGGAAACTCAGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTGCTGGAAGTAAGGCTGAGCATTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGGTTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGATATGTTGCGTGTACTTTCTCGGAAGCAAGTGGTCGTGGTTGGTGAAAGGACGTCTGAGGACTTTGAAAGCATGCTTGCTGCAGCTCATGCAGTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGACGAGATGGAATTTTGGGAAGTAAATAACAGTAATGTTGCTCTCATGGCAAAAAATAACTTTGCAGTCAACAAGGTTGTAGCTCTTGTATGCCAAAACTTCACTTGTAGCCCCTCTGTGACTGACCATTCGTCACTTAAAGCTTTGCTCTCCAAAAAACCTTCCTCTTCGTTCACGTAA 2430 0.4391 MHLLLSKSPLLLIHNSSMLLHRFSPLLLPRFLFRQPPFPSLNFKPLTLKVLSMASSHSSHHIHTNRLASEQSPYLLQHAHNPVDWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEAVAKLLNDWFVSIKVDREERPDVDKVYMSYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKEAWDSKRDMLIKSGSYAIEQLSEAMSASSDSDKLPDGVPADALRLCSEQLSGSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLGVANGSQQMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWTSKEVEDLLGEHAALFEEHYYIKQLGNCDLSGMSDPHDEFKGKNVLIERKEPSELASKYGMSVETYQEILGECRHKLFEVRSRRPKPHLDDKVIVSWNGLAISSFARASKILKGEAEGTKFYFPVIGTEPKEYMGIAEKAASFIRKQLYNVETHRLHHSFRHSPSKAPAFLDDYAFLISGLLDLYEFGGGISWLLWAIELQETQDALFLDKTGGGYFNNTGEDASVLLRVKEDHDGAEPSGNSVSAINLIRLASMVAGSKAEHYKRNAEHLLAVFEKRLKDMAMAVPLMCCAADMLRVLSRKQVVVVGERTSEDFESMLAAAHAVYDPNRTVIHIDPNNKDEMEFWEVNNSNVALMAKNNFAVNKVVALVCQNFTCSPSVTDHSSLKALLSKKPSSSFT* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1780 809 PIRSF UCP006402_thioredoxin 48 807 IPR024705 -
Gso3g1780 809 SUPERFAMILY Thioredoxin-like 63 206 IPR036249 -
Gso3g1780 809 CDD SSP411 86 208 IPR004879 -
Gso3g1780 809 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 54 802 IPR024705 -
Gso3g1780 809 SUPERFAMILY Six-hairpin glycosidases 253 647 IPR008928 GO:0005975
Gso3g1780 809 Pfam Protein of unknown function, DUF255 64 225 IPR004879 -
Gso3g1780 809 Gene3D Glutaredoxin 62 234 - -
Gso3g1780 809 Gene3D - 535 711 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1780 Gso-Chr3 43557172 43563054 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1780 - - gmx:100777751 1577.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1746 19 46319396 46325521 Gso3g1780 3 43557172 43563054 GST