Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1746 ATGGCATCATCTCATTCCCACATACACATTAATCGACTCGCTTCCGAGCAGAGCCCCTACCTTCTCCAACACGCACATAACCCTGTTCATTGGTATCCCTGGGGTGAAGAAGCCTTCGCCGAAGCGCGCCGCCGAGACGCGCCTATCTTCTTGTCAATTGGTTACAGCACTTGTCACTGGTGTCATGTTATGGAGGTCGAGTCTTTCGAGGATGAAGCGGTTGCCAAGTTGCTGAACGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTGTACATGTCGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCACCTGACTTGAAACCTTTAATGGGTGGAACTTACTTCCCCCCTGATGACAAGTATGGACGACCTGGATTTAAGACTATACTTAGAAAGTTAAAAGAAGCTTGGGATAGTAAGAGGGATATGCTGATTAAGCGTGGATCATATGCAATTGAACAACTTTCTGAGGCAATGTCTGCTAGTTCAGATTCTGATAAACTGCCTGATGGGGTTCCAGCTGATGCGTTACGCCTATGCTCGGAGCAGCTTTCTGGGAGCTATGATTCAAAGTTTGGTGGTTTTGGATCTGCACCAAAGTTTCCCAGACCAGTTGAGATAAACTTGATGCTATATCACTCCAAAAAGTTGGAAGATACGGGGAAGTTGGATGGAGCTAATAGAATTCAGAAAATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGCGGGATGCATGATCATATTGGAGGGGGATTTCACAGATACAGTGTGGATGAGTGCTGGCATGTCCCACATTTTGAGAAGATGCTTTATGATCAAGGGCAGCTTGCTAATGTTTATCTAGATGCGTTTTCTATCACAAAAGATACCTTTTATTCATATATATCACGGGATATCCTTGATTATTTAAGGAGAGATATGATTGGTCCAGAAGGTGAAATTTTTTCAGCAGAGGATGCTGACAGTGCAGAGACTGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGACAGGCAAAGAGGTTGCAGACATACTTGGAGAGCATGCTGCTCTTTTCGAGGAGCACTATTACATCAAGCAATCAGGTAACTGTAACCTATCTGGAATGAGTGATCCTCACGATGAATTCAAGGGAAAGAATGTCCTGATTGAGAGAAAGGAACCTTCAGAACTGGCATCAAAATATGGCATGTCAATTGAGACATATCAAGAAATTCTTGGAGAGTGCAGGCATAAGTTGTTTGAAGTAAGGTCAAGGCGTCCAAAGCCACATTTGGATGATAAGGTTATTGTATCATGGAATGGACTGGCAATCTCATCTTTTGCTAGGGCTTCTAAGATTCTCAAGGGTGAAGTTGAAGGGACCAAATTCTACTTTCCTGTCGTTGGCACTGAAGCAAAGGGGTACTTGAGAATTGCAGAAAAAGCAGCATTCTTTATTTGGAAACAGCTTTACAATGTGGAAACTCACAGGCTACACCATAGTTTCAGACATTCTCCGTCTAAAGCTCCTGCTTTCTTGGATGATTATGCTTTTCTGATTTCTGGATTGCTGGATCTCTATGAATTTGGTGGTGGAATTAACTGGCTTCTATGGGCCATTGAATTGCAGGAAACCCAGGATGCCTTGTTTCTTGATAGGACAGGAGGTGGATATTTCAATAATACAGGAGAAGATTCTTCCGTTCTCCTCCGGGTAAAGGAAGACCATGATGGTGCAGAACCCTCAGGAAACTCAGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTGCTGGAAGTAAGGCTGAGCACTATAAGCAAAATGCAGAACATCTATTGGCCGTTTTTGAGAGAAGGTTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGTTGCATGTACCTTCACGGAAGCAAGTGGTTGTGGTTGGTGAAAGGACTTCTGGGGACTTTGAAAACATGCTTGCTGCAGCTCATGCATTATATGATCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATGGGATTTTGGGAAGTAAATAACAGCAATGTTGCTCTCATGGCAAAAAATAACTTTGCAGTTGACAAGGTTGTAGCTCTTGTATGCCAAAACTTCACTTGTAGCCCCCCTGTCACTGATCATTCGTCACTTGAATCTTTGCTCTCCAAAAAACCTTCCTCTTCATTAACATAA 2268 0.4312 MASSHSHIHINRLASEQSPYLLQHAHNPVHWYPWGEEAFAEARRRDAPIFLSIGYSTCHWCHVMEVESFEDEAVAKLLNDWFVSIKVDREERPDVDKVYMSYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKLKEAWDSKRDMLIKRGSYAIEQLSEAMSASSDSDKLPDGVPADALRLCSEQLSGSYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEDTGKLDGANRIQKMVFFSLQCMAKGGMHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMIGPEGEIFSAEDADSAETEGAARKKEGAFYIWTGKEVADILGEHAALFEEHYYIKQSGNCNLSGMSDPHDEFKGKNVLIERKEPSELASKYGMSIETYQEILGECRHKLFEVRSRRPKPHLDDKVIVSWNGLAISSFARASKILKGEVEGTKFYFPVVGTEAKGYLRIAEKAAFFIWKQLYNVETHRLHHSFRHSPSKAPAFLDDYAFLISGLLDLYEFGGGINWLLWAIELQETQDALFLDRTGGGYFNNTGEDSSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVAGSKAEHYKQNAEHLLAVFERRLKDMAMAVPLMCCAADMLHVPSRKQVVVVGERTSGDFENMLAAAHALYDPNRTVIHIDPNNKEEMGFWEVNNSNVALMAKNNFAVDKVVALVCQNFTCSPPVTDHSSLESLLSKKPSSSLT* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1746 755 PIRSF UCP006402_thioredoxin 1 753 IPR024705 -
Gso19g1746 755 Gene3D Glutaredoxin 9 180 - -
Gso19g1746 755 Gene3D - 478 658 IPR012341 GO:0005975
Gso19g1746 755 CDD SSP411 32 154 IPR004879 -
Gso19g1746 755 Pfam Protein of unknown function, DUF255 11 171 IPR004879 -
Gso19g1746 755 SUPERFAMILY Thioredoxin-like 11 137 IPR036249 -
Gso19g1746 755 MobiDBLite consensus disorder prediction 736 755 - -
Gso19g1746 755 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 3 748 IPR024705 -
Gso19g1746 755 SUPERFAMILY Six-hairpin glycosidases 199 593 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1746 Gso-Chr19 46319396 46325521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1746 - - gmx:100805578 1515.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1746 19 46319396 46325521 Gso3g1780 3 43557172 43563054 GST