Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1759 ATGGCTGAGGCTTCTTCGCCTCACTCTCAAACATCGTCACCCCCTGGTGGTTATAAAATTAAAGACGCAAATGAAGACGATCAATTTAGGGAAACTGAGCTCTTTGAGGACACCTTAGTGCTCAATAGTCCTTTCACTGAAATGGAGGTGGAGAATCTCAATCTGAACACTGAGATTGTGGAGGACTTGACAACTGGTACGATGTGCGAGTATGAACAAGTAGTGCTCGACAGTGAGGACGAAGAAATGAATGATAGGGGTGTTGGCAAGGGACTTCTTAATAGACAGCCCAAGTCACCTTGGGAGCAAGTAGATGCAAATGGCACCACTTTTGAGAAGTCTACTGCTGGGTACAAAGGAGCTTTAGTTGATGGTGACAGCTTTGATGACAACAACCATTCATATCCACCTGCAATGCTAAGTCACATTCACTCACCAGAGCCTGGGGATTCCACTGAAGCTGCACTTGGCTTTGTGGATCAGTACTTGTCATCAAATGATATGGACTTGTTTCAAGGAATTCATCGTGGAAAGACCACTAGGGAGAAATCACCTTATGATGTCCTGAGTGCAAGAGGAGCACTAAATCTGGCTAAGAAAATTAAAGCTCGAACTCAAAATGAAGAAAAAGAACCTTTCAAATGGGTTGAAAGTTGCCAACATGACAACAAAGCTGGTATGTTTGGTAAAAAAATTGAAGCATCTTCAAATTTTGGAAGATACAAACAGACATATACGAGAAAAAGGCCGAAAGAAGGTGGCCATCTTCAGGGACAAGGAAACTGTAATACAAGTAATAGATGTGATGAGAGGTTACGCCAAGGATCAAGAATGGCAACTAAAAATAATAACTCTCCAAAGGAATTGGATGTTCAACCAATTGCTATAAATGAGAATGTTAATGTTTATTCCAGTGTAACACATATAGAAGACATGTATGATATTGGTTTAGACACTCAAATAGCTGCTGAAGCTATGAATGCCTTAGCCTTTGTGCCCCCTTCTGGCTGCCAGTTTAATGATACTCATCAACCAGAGAATGCATTAGATGGCTCTTTGAGCGACTTGACAGAAAATGAAGCTCGTCTGAAGAATTCTTCATATATTCAGAATCCTGATTTACATTCTATCACAATAAAATCAAATAAGAAAAATGCATCTTCTTCTAGATTTAGTAAAATAACTTTTAACTCAGCTTGCAAGCAGGAGCCAAATCTTGTATCATGGAAAATGAAAAAAATGAGAAGCAAGTCATCTTCTGAGGGACAGTTTGAAAATAATACTAGTTTTACAATGTGCAGTAAACATGTATCGCTTGAAGAGGTTTGCTCACTGGGAGAGCATACAAGTTTCCAACCTGCTGCCGAAGAATCCGAAGATTGGAACAATGAGAGCAGACAGACAAGAATCAAAGATCAACAAAGCCATCTTACAGAGGGGAACAATAATGTCAAGGAGAAGGGTATTAAACACAAGAGGAAGGGGAATGATTTAGAGGCTGAACCAGTGAAGTTTGGTGTTTGGACAAGGCGTCTTAAATTCCCTACCAATTCATGTACAGTTGCTAGGAAAAGCAGGTTGAATCATCTGGCTCAAGTTAGTCCACAGTTATCTGCAACCAGCAGTTTTTCAAGGACTGATTCTTGGGTGTATCCAAAAAGATCGAGAGGGAAAAGAAAGGGGGCTAATGTGGGAACCAGTCTTGATGCACCAACAGCTGTGTGTATTGATGGAAAAGAAAACAAAGTTTTCTCCACTAGAAGTCTACAGGATCAAGATGATGTGGATAAATCATGTTTTCCTCACACCCGTCCACTCTGCAATGCTTCATGTGCAGATGATGGCAGATGCTTGTTGCAGGGAAACTTTGTGCCACCAGGTTCAGCTGGTGATGCAATGAAGGTAGAAAACTTGCCTGATATGCACCCCTTATTGCAGGCACATGTTGGAATATCATCAAACAAAAGCATTGCACAATCGAGATCAGAAATGCCAGCTACAGTTACTGCAAGCAAAGGCATAAAAGTTTCAAATGCTAACCATACATACACTGAGCATCAACAAAAGCTATGTGAAAAAACCCTGCCAAAGACTTCAGTTTTGAAAGAGCTTATCAGATTAGGAGCTCCCAAGTTCACATCAGATAAGATGTGGAAAGATCTGAGACATCGAAGAGATATGACAGATGTTCGAGTTCTGTTTAGCCAACATTTGGATGACAGTATTATGAAGCAGCAAAAAAAGATCTTGGCACGTCTCAATATATCTGTGGCATCATGTTCAATGGAGGCCACACATTTCATAGCAGACAAATTTACACGCACAAGGAATATGTTGGAAACAATGGCTCTTGGGAAATTAGTCGTGAATCACTTATGGCTTGAGAGCTGTGGACAAGCCAACTGTTTTATTGATGAGAAAAATTACATTCTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTTAACATGCCTGTTTCTCTTGCTCGAGCAAGACAGAAGCCGCTCCTAAAGGGTAAAAGAGTCTACATCACGCCACATATTAAACCTGATAAGGAAGTGGTTGCAAGTTTGGTCACAGCTGTTCATGCCCAGGTAGTTGATGAAAGTGAGGTGTGTGCAGACATGAATGATAATGTCTTTGATGATCTGTTGATTCTTTCTTGTGAGGACGACTATGCAATATGCCACCGTTTCCTTAAGAGAGGAACTGCAGTTTACAGTTCAGAGCTTGTTCTGAACGGAATTGTAATCCAAAAATTGGAACTTGAGAGACACCAACTCTTCATGAATCAAGTTACAAGGAATAACCCAAGTGCGTCGAATCGGTTTGGGAAGATTTACAGAAGGCGTAGAGGCCTTTTTTCTGGACCGTAG 2877 0.4077 MAEASSPHSQTSSPPGGYKIKDANEDDQFRETELFEDTLVLNSPFTEMEVENLNLNTEIVEDLTTGTMCEYEQVVLDSEDEEMNDRGVGKGLLNRQPKSPWEQVDANGTTFEKSTAGYKGALVDGDSFDDNNHSYPPAMLSHIHSPEPGDSTEAALGFVDQYLSSNDMDLFQGIHRGKTTREKSPYDVLSARGALNLAKKIKARTQNEEKEPFKWVESCQHDNKAGMFGKKIEASSNFGRYKQTYTRKRPKEGGHLQGQGNCNTSNRCDERLRQGSRMATKNNNSPKELDVQPIAINENVNVYSSVTHIEDMYDIGLDTQIAAEAMNALAFVPPSGCQFNDTHQPENALDGSLSDLTENEARLKNSSYIQNPDLHSITIKSNKKNASSSRFSKITFNSACKQEPNLVSWKMKKMRSKSSSEGQFENNTSFTMCSKHVSLEEVCSLGEHTSFQPAAEESEDWNNESRQTRIKDQQSHLTEGNNNVKEKGIKHKRKGNDLEAEPVKFGVWTRRLKFPTNSCTVARKSRLNHLAQVSPQLSATSSFSRTDSWVYPKRSRGKRKGANVGTSLDAPTAVCIDGKENKVFSTRSLQDQDDVDKSCFPHTRPLCNASCADDGRCLLQGNFVPPGSAGDAMKVENLPDMHPLLQAHVGISSNKSIAQSRSEMPATVTASKGIKVSNANHTYTEHQQKLCEKTLPKTSVLKELIRLGAPKFTSDKMWKDLRHRRDMTDVRVLFSQHLDDSIMKQQKKILARLNISVASCSMEATHFIADKFTRTRNMLETMALGKLVVNHLWLESCGQANCFIDEKNYILRDMKKEKEIGFNMPVSLARARQKPLLKGKRVYITPHIKPDKEVVASLVTAVHAQVVDESEVCADMNDNVFDDLLILSCEDDYAICHRFLKRGTAVYSSELVLNGIVIQKLELERHQLFMNQVTRNNPSASNRFGKIYRRRRGLFSGP* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1759 958 SUPERFAMILY BRCT domain 718 827 IPR036420 -
Gso3g1759 958 CDD BRCT_PAXIP1_rpt6_like 836 922 - -
Gso3g1759 958 Gene3D BRCT domain 835 936 IPR036420 -
Gso3g1759 958 CDD BRCT_MDC1_rpt1 730 804 - -
Gso3g1759 958 Gene3D BRCT domain 717 834 IPR036420 -
Gso3g1759 958 MobiDBLite consensus disorder prediction 1 17 - -
Gso3g1759 958 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 10 937 - -
Gso3g1759 958 MobiDBLite consensus disorder prediction 1 28 - -
Gso3g1759 958 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 722 811 IPR001357 -
Gso3g1759 958 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 10 937 - -
Gso3g1759 958 ProSiteProfiles BRCT domain profile. 722 811 IPR001357 -
Gso3g1759 958 MobiDBLite consensus disorder prediction 246 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1759 Gso-Chr3 43396345 43401442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1759 K14972 - gmx:102667761 1915.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1726 19 46147786 46152953 Gso3g1759 3 43396345 43401442 GST