Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1726 ATGGCTGAGGCTTCTTCGCCTCGCTCTCAAACTTCATCATCCCCTGGCGGATATACAGTTAAAGACGCAAATGAAGAGGATCAATTTAGGGAAACTGAGCTCTTCAAGGACTCCTTTGTGCTCAATAGTCCATTCACTGAAATGGAGGTTGAAAACCTTAATCTGAACACTGAGATTGTAGAGGATACGGAGCCTGCAGAGGACATGACAACTGGTACAATGTGTGAGTATGAACAAGTTGTGCTCGACAGTGAGGACGAAGAAATGAATGATAGAGGTGTTGGCAAAGGATTTCTTAAGGATGAAACTAGTCCAACAGTGAAAATTCATTCGACTCTCTTTCAAAAGAGACAGCCCAAGCCACCTTGTGAGCAAGTAGATGCAAATGCCACCACTTTTGGGAAGTCTACTGCTGGGTACAAAGGAGCTTTAGTTGATGCTGACGGCTTTGATGACAACAACCATTTATATCCACCTGCAATGCTAAGTCACATTCACTCACCAGAGCCTGGGGATTCCACTGAAGCTGCACTTGGCTTTGTGGATCAGTACTTGTCATCAAATGATGTGGACTTGTTTCAAGTAATTCATTATGGAAAGACCACTAGGGAGAAATCACCTTATGTCTTGAGTTCTAGAGGACCACTAAATCTGGCTAAGAAAATTAAAGCTCGAACTCAAAGTGAAGAAAAAGAACCTTTCAAATGGGTTGATAGTTGCCAACATGACAACAAAGCTGGTATTTTTGGTAAAAAAATTGAAGAATCTTCAAATTTTGGAAGATACAAACAGACATATACGAGAAAAAGACAAAAAGAAGGTGGCCATCTTCAGGGACAAGGAAACTGTAATACAAGTAATAGATGTGATGAGAAGTTACGCCAAGGACCAAGAACGGAAACTGAAAATAATAACTCTCTCAAGGAATTGGATGTTCAACCAAGTGCTATAAGTGAGAATGTTAATGTTTATTCCAGTGTAACACATATAGAAGACTTGTATGATATTGGTTTAGACACTCAAATAGCTGCTGAAGCTATGAATGCCTTAGCCTTTGTGCCCCCTTCTGGCTGCCAGTTCAATGATACTCATCAACCAGAGAATGCATTAGATGGCTCTTTGAGCGACTTGACAGAAAATGAAGCTCTTCTGAAGAATTCTTCAGAGATTCAGAATCCTGGTTTACATTCTATCACAATAAAATCAAATAAGAAAAATCCATCTTCCTCTAGATTTAGTAAAATAACTTTTAGCTCTTCTTGCAAGCACACTGACAAGCAGGAGCCAAGTCTTGTATCATGGAAAATGAAAAAAATGAGAAGCAAGCCAAATTCTGAGGGACAGATTGATAATAATACTAGTTTGCCAATATGCAGTAAACATGTATTGCTTGAAGCGGTTTGCTCACTGGGAGAGTCCACAAGTTTGCAACCTGCTGCTGAAGAACCTAAGGATTGGAACAATGAGAGCAGGCAGACAAGAATCAAAGATCAACCAAGTCATCATACAGAGGGGAACAATAATGTTACGGAGAAGGGTATAAAACACAAGAGGAAGGGGAGTGGTTTAGTGGCTGAACCAGTGAAGTTTGGTGTTAGGACAAAGCGTCTTAAATTGCCTACCAATTCATGTACAGTTGCTAGGAAAAGCAGGTTGAATCATCTGGCTCAAGTTAGTCCACAGTTATCTGCAATCAGCAGTTTTTCAAGGCCTGATTCTTGGGTTTATCCAAAAAGATCGAGAGGGAAAAGAAAGGGGGATAATGTGGGAACCAATCTTAATGCACCAACAGTTGTGTGTATTGATGGAAAAGAAAATAATGTTTTCTCCCCTAGAGGTCTAGAGGATCAAGATGATGTGGATAAACCATGTTTTCCTCACACCCATCCACTCTGCAATGCTTCATGTGTAGACAATGCCAGATGCTTGTTGCAGGGGAACTTTGTGCCACCAGGTTCAGCTGGTGATGCAATGAAGGTAGATAACTTGCATGATATGCACCCGTTATTGCTGGCACATGTTGAACTATCATCAAACAAAAGCATCGCACAATCGAGATCAGAAATTCCAGCTACAGTTACTGCAAGCAAAGGCATAAAAGTTTCAAATGCTAACCATACATACACTGAGCATCACAAAAAGCCATGTGAAAAATCCCTGCCAAAGACTTCGGTTTCAGTTTTGAAAGAGCTTATCAGATTAGGAGTTCCTGAGTTCACGTCAGATATGATGTGGAAGCATCTGAGACATCGAAGAGATATGACAGATGTTCAAGTACTGTTTAGCCAACATTTGGATGACAGTATTATCAAGCAGCAAAAAAAGATCTTGGCACGTCTCAATATATCTGTTGCGTCAAGTTCAATCGAGGCCACACATTTCATAGCAGACAAATTTACACGCACAAAGAATATGTTGGAAACAATGGCTCTTGGGAAATTAGTTGTGAATCACTTATGGCTTGAGAGCTGTGGACAAGCCAACTGTTTTATTGACGAGGAAAATTACATTCTGAGGGATATGAAAAAGGAAAAGCAAATAGGCTTTAACATGCCTGTTTCTCTTGCTCAAGCAAGACAAAAGCCGCTCCTAAAGGGTAAAAGAGTCTACATCACGCCACATATTAAACCTGATAAGGAAGTTCTTGTAAGTTTGGTCACCGATGTTCATGGCCAGGTAGTTGATGAAAGTGGGGTGTGCGCAGACATGAATGATAATAGCTTAGATGATCTGTTGATTCTTTCTTGTGAAGACGACTATGCAATATGCCACCGTTTCCTTAAGAGAGGAACTGCAGTTTACAGCCCAGAGCTTGTTCTGAATGGAATTGTAATCCAAAAATTGGAACTGGAGAGACACCAACTCTTCATGAATCAAGATACAAGGAATAACCCAAGAGTGTCTAATCGGTTTGGGAAGATTTACAGAAGGCGTTGA 2937 0.4052 MAEASSPRSQTSSSPGGYTVKDANEEDQFRETELFKDSFVLNSPFTEMEVENLNLNTEIVEDTEPAEDMTTGTMCEYEQVVLDSEDEEMNDRGVGKGFLKDETSPTVKIHSTLFQKRQPKPPCEQVDANATTFGKSTAGYKGALVDADGFDDNNHLYPPAMLSHIHSPEPGDSTEAALGFVDQYLSSNDVDLFQVIHYGKTTREKSPYVLSSRGPLNLAKKIKARTQSEEKEPFKWVDSCQHDNKAGIFGKKIEESSNFGRYKQTYTRKRQKEGGHLQGQGNCNTSNRCDEKLRQGPRTETENNNSLKELDVQPSAISENVNVYSSVTHIEDLYDIGLDTQIAAEAMNALAFVPPSGCQFNDTHQPENALDGSLSDLTENEALLKNSSEIQNPGLHSITIKSNKKNPSSSRFSKITFSSSCKHTDKQEPSLVSWKMKKMRSKPNSEGQIDNNTSLPICSKHVLLEAVCSLGESTSLQPAAEEPKDWNNESRQTRIKDQPSHHTEGNNNVTEKGIKHKRKGSGLVAEPVKFGVRTKRLKLPTNSCTVARKSRLNHLAQVSPQLSAISSFSRPDSWVYPKRSRGKRKGDNVGTNLNAPTVVCIDGKENNVFSPRGLEDQDDVDKPCFPHTHPLCNASCVDNARCLLQGNFVPPGSAGDAMKVDNLHDMHPLLLAHVELSSNKSIAQSRSEIPATVTASKGIKVSNANHTYTEHHKKPCEKSLPKTSVSVLKELIRLGVPEFTSDMMWKHLRHRRDMTDVQVLFSQHLDDSIIKQQKKILARLNISVASSSIEATHFIADKFTRTKNMLETMALGKLVVNHLWLESCGQANCFIDEENYILRDMKKEKQIGFNMPVSLAQARQKPLLKGKRVYITPHIKPDKEVLVSLVTDVHGQVVDESGVCADMNDNSLDDLLILSCEDDYAICHRFLKRGTAVYSPELVLNGIVIQKLELERHQLFMNQDTRNNPRVSNRFGKIYRRR* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1726 978 MobiDBLite consensus disorder prediction 268 313 - -
Gso19g1726 978 CDD BRCT_MDC1_rpt1 757 831 - -
Gso19g1726 978 MobiDBLite consensus disorder prediction 484 501 - -
Gso19g1726 978 MobiDBLite consensus disorder prediction 299 313 - -
Gso19g1726 978 MobiDBLite consensus disorder prediction 1 28 - -
Gso19g1726 978 Gene3D BRCT domain 860 962 IPR036420 -
Gso19g1726 978 CDD BRCT_PAXIP1_rpt6_like 863 949 - -
Gso19g1726 978 ProSiteProfiles BRCT domain profile. 749 838 IPR001357 -
Gso19g1726 978 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 750 838 IPR001357 -
Gso19g1726 978 SUPERFAMILY BRCT domain 751 854 IPR036420 -
Gso19g1726 978 MobiDBLite consensus disorder prediction 1 19 - -
Gso19g1726 978 Gene3D BRCT domain 746 859 IPR036420 -
Gso19g1726 978 MobiDBLite consensus disorder prediction 475 520 - -
Gso19g1726 978 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 10 963 - -
Gso19g1726 978 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 10 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1726 Gso-Chr19 46147786 46152953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1726 K14972 - gmx:102659913 1954.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1726 19 46147786 46152953 Gso3g1759 3 43396345 43401442 GST