Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1724 ATGGAATCTGAAAACAGGGTTGCTGTGGAGGTAGAGAAACGTATTATTGGGGTAACAACCAAGGTGGAGAATATAAAGAAAGAAGTAGAAAATGACTGTAATGGCGCAGAAATTCAGACTAAGAATGAAGTTTCTAAACCCACAGTGGATGCTAAAGGCCCCATTTCTGCTGGTGACAAAGTTGTAATTGAAGCCTCTAAAACTTCTGCAAATAAAAATTCAAAAGGTGCCAAGGAAACTGGTGGTAGAGCAAGTGTTGCTTCCAGGAGCAACAAATATGCCAAAGACAAACCCATTTTGAAGGGTCCAATTTCAATATCTCAAAAACTAAGGCCATCCCTTTCACAAAGCCTTTCTTTCCCAGCCAAATCAGCTGGTGAAGATGCTATGCAGAAAAGCATTGATGGGTATCTTGTGAAGCCAAAAGTTAGACATATTCAAGGTAATGGGATCAGAGGTGAGGGCCACATTCGTCATTTAAACAAGTCAACAAACTCTGAAGGCAACTCCCTGGCAAAAACCAACACTGGCATGCCTGCTTTGAAACGCTCTGCGTTTGGTAGGTCCACTACAGTTACTGCATTCACCAAGAGCCAAACTTCTGAGGCATCGTTACCCGTTGATCAGGTGTCAAGCACAGCAAAAACTGCAAAAGCAAATAAAGAGGATGATGATTCTCATTCCACAACTTCCAGAAGTGCTACCCCTTGTCTGAGAAGCAATGGAAGTGGATTTTCCTTTAGATTGGAAGAAAGAGCTGAGAAGCGGAAGGAGTTTTTCTCAAAAATTCTAGCCAAGGAAGCAGAGAAAACTAACCTACAAGTTAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCTATTGAGGAAGAGCATGGCATTCAAAGCAACTCCAATGCCAAGTTTCTATAAGGAACCACCTCCCAAAGTTGAGCTGAAGAAGATACCAACAACACGCCCAAGATCCCCAAAGCTTGGCAGGCACAAAGAACCTACTATGAACAACAATTCAGGAGAAGATAAGTCTTATCTTCGGACTTGA 1041 0.4217 MESENRVAVEVEKRIIGVTTKVENIKKEVENDCNGAEIQTKNEVSKPTVDAKGPISAGDKVVIEASKTSANKNSKGAKETGGRASVASRSNKYAKDKPILKGPISISQKLRPSLSQSLSFPAKSAGEDAMQKSIDGYLVKPKVRHIQGNGIRGEGHIRHLNKSTNSEGNSLAKTNTGMPALKRSAFGRSTTVTAFTKSQTSEASLPVDQVSSTAKTAKANKEDDDSHSTTSRSATPCLRSNGSGFSFRLEERAEKRKEFFSKILAKEAEKTNLQVKSKENQEAEIKLLRKSMAFKATPMPSFYKEPPPKVELKKIPTTRPRSPKLGRHKEPTMNNNSGEDKSYLRT* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1724 346 MobiDBLite consensus disorder prediction 329 346 - -
Gso3g1724 346 Coils Coil 266 286 - -
Gso3g1724 346 MobiDBLite consensus disorder prediction 307 328 - -
Gso3g1724 346 PANTHER PROTEIN WVD2-LIKE 4 1 342 IPR044833 GO:0008017
Gso3g1724 346 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 342 - -
Gso3g1724 346 Pfam Targeting protein for Xklp2 (TPX2) domain 245 310 IPR027329 -
Gso3g1724 346 MobiDBLite consensus disorder prediction 197 216 - -
Gso3g1724 346 MobiDBLite consensus disorder prediction 197 243 - -
Gso3g1724 346 MobiDBLite consensus disorder prediction 66 107 - -
Gso3g1724 346 MobiDBLite consensus disorder prediction 298 346 - -
Gso3g1724 346 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1724 Gso-Chr3 43094342 43099095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1724 - - gmx:100815009 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1691 19 45851206 45855878 Gso3g1724 3 43094342 43099095 GST
Gso3g1724 3 43094342 43099095 Gso2g1637 2 38547876 38552223 PCT
Gso3g1724 3 43094342 43099095 Gso10g0746 10 10497852 10501523 PCT
Gso2g1637 2 38547876 38552223 Gso3g1724 3 43094342 43099095 PCT
Gso10g0746 10 10497852 10501523 Gso3g1724 3 43094342 43099095 PCT