Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0746 ATGGAATCTGAAAATGGAGTCGCTATGGAGGACGAGAAACACGTCATTGGGGAAACAACCAAGGAGAATATAAACAAAGAAGCTGAAAACAGTTGTAATTCTGAAATTCAGACCAAGAATGAGGTATCTGAAGCTGTTGTAAAAGTTGAAGGTCCCAAATCTGCAGCAAGTAAAATCTCAAAACTTGCCAAGGAACATGGTGGCAAAGGTGGTGTTGCTTCAAAGAACAACAAATCTGCCACCAAAGACAAACCCAATTTGAAGTCTACAACTTCATCTCAGACACACAGGCCAAACCTTTCCAAGAGCCTTTCTTTGCCAGCCAAATCAGCTGGAGGAGATGGCATGAAGAAAAGCACTAATGGAACTCTCGCGAAGCCAGAAACTAAGCATGCTAATGGGGCTAAAGCTGAGGCTTCCATTCGCCGTTTAAGCAGGCTGACGAACTCTGAAGTTAACTCAAAAGAGGCAAAAACAAACACTGGAAATTCTAACCAGAGGACTTCTTTGGCATCCATGATTAGCCTTAAAACCTCTGAGTCTGGAATATCTACTCCAGTGAATGCGGTTACCAAGAGCCTTACATCTGAGGAATCATTACCTGTTGATCAGATTTCAATTCCAGCAAAAACTGAAAAACCAAATAAAGAGGAAGATGATGCTCATTCTACAACTTCAAGTCATACTCCTCGTAGGAGGAGCAGTGGTTCTGGATTTTCCTTCAGATTGGAAGAACGAGCAGAAAAGAGGAAGGAGTTCTTCTCAAAGTTAGAAGAGAAAATTCAGGAAAAGGAGGCAGAGAAAACTAACCAGCAAGAGAAATCAAAGGAAAACCAGGAGGCTGAGATCAAGCAATTGAGGAAGACCATGACTTTCAAAGCCACTCCAATGCCAAGTTTCTACAAGGAACCTCCTCCAAAAGTTGAATTGAAGAAGATACCAATAACGCGCCCAAAATCTCCAAAGCTTGGAAGGCACAAAGGATCTGCTGTGAACAAATCAGCAGACAAATCTTGTTCTAGTCCACATGGAAAGCAGCAACAGAATGATCCAACCAAGGCAAAGGCAAAGGGTAGTAATAAAGAAGTGATTTCAAAGAAACCAATCAGAAAAATTCAAGCCAAGGTGCAGTCTCAGGAAAGTGCAATCAGAAAAACTGAAAAGGATTCTGTGAAGCCCACTAAAGTCAACCAAGATGCAAAAGCAGGCACAGGAAACAATGAAGAATGCCATGATCCATCAGTTAACAATTCTGAATACCAAAATGACATGGAGCTAGAATCCAAAAATGAACTTGATCAGAATGTTGCACTGGTCTTGAACTCATCCCCACCTGAGATTGTATCATATGAGGTTGCTGTTGGAGTGTAG 1371 0.4165 MESENGVAMEDEKHVIGETTKENINKEAENSCNSEIQTKNEVSEAVVKVEGPKSAASKISKLAKEHGGKGGVASKNNKSATKDKPNLKSTTSSQTHRPNLSKSLSLPAKSAGGDGMKKSTNGTLAKPETKHANGAKAEASIRRLSRLTNSEVNSKEAKTNTGNSNQRTSLASMISLKTSESGISTPVNAVTKSLTSEESLPVDQISIPAKTEKPNKEEDDAHSTTSSHTPRRRSSGSGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKTNQQEKSKENQEAEIKQLRKTMTFKATPMPSFYKEPPPKVELKKIPITRPKSPKLGRHKGSAVNKSADKSCSSPHGKQQQNDPTKAKAKGSNKEVISKKPIRKIQAKVQSQESAIRKTEKDSVKPTKVNQDAKAGTGNNEECHDPSVNNSEYQNDMELESKNELDQNVALVLNSSPPEIVSYEVAVGV* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0746 456 MobiDBLite consensus disorder prediction 74 106 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 26 41 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 1 25 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 1 244 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 262 426 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 333 354 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 397 423 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 355 369 - -
Gso10g0746 456 Pfam Targeting protein for Xklp2 (TPX2) domain 239 307 IPR027329 -
Gso10g0746 456 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 456 - -
Gso10g0746 456 Coils Coil 369 389 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 381 395 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 262 287 - -
Gso10g0746 456 Coils Coil 247 289 - -
Gso10g0746 456 MobiDBLite consensus disorder prediction 143 202 - -
Gso10g0746 456 PANTHER PROTEIN WVD2-LIKE 4 1 456 IPR044833 GO:0008017
Gso10g0746 456 MobiDBLite consensus disorder prediction 210 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0746 Gso-Chr10 10497852 10501523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0746 - - gmx:100798810 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1637 2 38547876 38552223 Gso10g0746 10 10497852 10501523 GST
Gso19g1691 19 45851206 45855878 Gso10g0746 10 10497852 10501523 PCT
Gso3g1724 3 43094342 43099095 Gso10g0746 10 10497852 10501523 PCT
Gso10g0746 10 10497852 10501523 Gso19g1691 19 45851206 45855878 PCT
Gso10g0746 10 10497852 10501523 Gso3g1724 3 43094342 43099095 PCT