Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1711 ATGATGATGATGGATCCGCCGATGACGCCGCTGGGGCAAATGCTATTGGAGGAGATCACTCCCGTCGTCATGCTCCTCTCAACTCCTTCCGTCGAACAAGTTTCCCTCAAGAACGGTCTCTCCTTCCTCCAGACGCTAACGCCGTTCTGCTCCTTCAACAACATCGACGTTCCTGTTAGGACCGCCAGTGACCAACCTTATCGCCTTCACAAGTTCAAATTGCGTTTGTTCTACGCTTCCGATGTGAGGAAGCCTGATTTGAAGGTAGCTAAAGAGCAAGTGAAGCAAGTTATCACAGAGGCAGGGGAGAAAGAGTTTTCTGAGTCGTGTTCAGATGTGTCAGAAATTAATCATGAACTTTCGTCGAGTTCCGAATACCAACATACACCATCCTGGTTTCGGTTTCTCAATAAAGAACTTGTTCGTGTGGCTTCCTTTTCAGACCATGAAGCATTTGACCATCCTGTGATATGTCTTGTTGCTGTTTCATCAAAGGATGAACAGCCTATTAGCAGATTTGTTGACCTTTGTAATGCCAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAAATTTCAAAGCATTACTTGTTAGTGCATGATAATCAAGATGGCCCTGCAGACAGAGCAAGTAAAATATTGACAGATATCAGGAGTACATTTGGTGCAAGTGACTGTTCATTGCTTTGCATTAATTCTTCCCTGGATGCTCCAATCAAACATCAAGATAATCCTTGGGCTTCATATATAACTGATGCCTCACCTACTCATAGTCAAGATTTTGGTTGCTTTCTCAACATTGATGATATCAACGAGATCAAAGATCTAATGCAAGATTTAGCATCTAAGCACATCATTCCAAATATGGAGCAAAAAATTCGTGTACTCAATCAACAGGTTTCTGCCACACGAAAAGGGTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATGGTGCAGATTCTCTCAATGGTCCCACGTATGACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGACTTACATACTTCATATTGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATCATTGGGTCAGCTAAATGCAACAAGATGTGGTCTGTGGTGGATAGAAATGTTAAAGGCACGTGATCAATATAAGGAGGCTGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGTTGTCTAAACCCTCCATGTTACACAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAGAGGAACTACTTGGAGTTATATAAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAAATCTTGGCCTGTAGTCACCAGTCCAAGACAACACAGGAATTATTCCTGGGCGACTTTCTTCAAATTGTCGAGAAAACTGGACGGACGTTTGAGGTAACAAAACTTCAATTGCCTGTAATCAACATCTCTTCACTGAAGATCATCTTCGAAGATTACCGAACTTTTGGAACATCTTCAGCTGCTAATACTAGAGAAGGCTTGTGGCACTCTTTGGAGGAAGAAATGCTACCATCATTCTCTTCTGCCAAGACAAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAGCACAGTCAATCGAATGTTTGTGTTGCAGGCGAAGCTGTGAATGTGAATATTGAATTTAAAAATCCTCTGCAAATCTCAATTCCCATATCTGGTGTTACACTTGTATGCAAGTATTCTGCCAGTACTGGTGATATTAGATCAGATGAGAATGAGTCAAGTGTGGAGAAAGATAATGAGGTTGACCACTTTAGGAATATGAGCTCCGACAATTCCTCATTTATGGTGTCCGAGGTTGATTTCTTACTAGGAGGCGGTGAAACAACCATGATACAACTATCAGTTACTCCCAGGGCAGAGGGTACTCTTGAAATTCTTGGTGTTAGGTGGAAACTGTCTGGTACAATAGTTGGCTTTCACAACTTTGAGTTGTGCCACCCAAAGAAGATTATAAAAGGAAGAAGGAAAACAAAGCACATGCCAAATGAGAAATTTAAATTTATGGTGATTAAGAGCATACCCAAGCTTCAGGGTTCCATTCACCCTCTACCTGGAAAGGCGTATGCTGGAGATTTACGACAACTTGTTTTGGAATTGAGGAATCCATCAGACTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGATTCCTGATAATTGGGAAGCAGGAAAATAGGAAGTCAGAGTTTCCTGCGTGCTTAAGAAAGAGAACAGATGCAGTACTAAGTGATGTGTATGCTAATCCTAACATCATGTCTGACACAGTCTTTTTGTTTCCAGAGGGCACATCAGTTCAAGGTGAAGCACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCTGGTGATATATCACTTTACATGAGCATATATTATGAGATGGGAGATGCATCAAGTGTCATCAAATATCGTACTCTTCGCTTGCATTACAATCTGCAGGTATTACCATCGTTGGATGTCTCATTTCAAATAAGTCCTTCTCGATTAAGATTACAAGAATTTCTCGTTCAATTGGATGTTGTTAACAAGACTAGCTCAGAAAGTTTCCAAGTTTATCAGTTGTCGTCAGTTGGTCACCGCTGGGAAATCTCGTTACTTCAAGCTCCTGATACTATTTTTCCTTCACAATCATTGAAGGCTGGCCAAGCAATATCTTGTTTCTTTACACTAAAGAATTCTTCGAGGTTTTCGACATTGGAGGACAACATATCTACATTGCCTGTCAGAAGTGATGTAAGATTGGTACCCCAAAGCAGTGAGGATTTAGTTTACGATATAAACAGTGCACCTTTGTTCAATTTCCACCATTATGAAAGATTGCAGCAGAAAGTTACATATGAGGGTGACTTAAATACTGTTGATTTTGTATTGATCTCTCGGCCATTCAAGAGTAATGACGATCCTGGTTTTTCCAATCCTCCTCATGTTATGTCTCATCATGCGTGTCACTTCAGTACTGCTAGCACGGGCCCTATTTCATGGCTAGTGGATGGACCTCAAACCTTACATCATGACTTCTCTGCATCATTCTGTGAAATAAGTCTGAAGATGCATATTTACAATTCTTCTGGTTCCACTGTTTTTGTACGCATTGACACCTTAGATTCTGCTGGTAATGGTGGGCACATGAACAGTGTAAATGTGGTTCAATCAGCAACTAGTGATAACCGAGCAGGGTGGCATGATATTACACCAGTGAATGAACTCAAAGTCACATCAAATGTTCTTGGAACCCAACCAGGAAAGGCACTATCATTGGAAAGTGTGCCTTCATATATTTGGTCTGGATCAAGCTCAACCAATCTCCACATTGATGCTATGTCCTCAGCAGAAATTCCTCTTCAGATCTGTGTGTTTTCCCCAGGGACATATGACCTGTCAAATTATGTTTTGAATTGGAAACATCCATCCAATGGTCAGGGAGACAGTGATGAAACGAAGCAGCATTCAGGCAAGTGCCAGGGCTATAAATACTATCTTACCGTGCTTCAGTCCACTTGA 3876 0.4061 MMMMDPPMTPLGQMLLEEITPVVMLLSTPSVEQVSLKNGLSFLQTLTPFCSFNNIDVPVRTASDQPYRLHKFKLRLFYASDVRKPDLKVAKEQVKQVITEAGEKEFSESCSDVSEINHELSSSSEYQHTPSWFRFLNKELVRVASFSDHEAFDHPVICLVAVSSKDEQPISRFVDLCNANKLPSLLNDGAMDPKISKHYLLVHDNQDGPADRASKILTDIRSTFGASDCSLLCINSSLDAPIKHQDNPWASYITDASPTHSQDFGCFLNIDDINEIKDLMQDLASKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDGADSLNGPTYDFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFILDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLHKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMMEILACSHQSKTTQELFLGDFLQIVEKTGRTFEVTKLQLPVINISSLKIIFEDYRTFGTSSAANTREGLWHSLEEEMLPSFSSAKTNWLELQSKLISKKHSQSNVCVAGEAVNVNIEFKNPLQISIPISGVTLVCKYSASTGDIRSDENESSVEKDNEVDHFRNMSSDNSSFMVSEVDFLLGGGETTMIQLSVTPRAEGTLEILGVRWKLSGTIVGFHNFELCHPKKIIKGRRKTKHMPNEKFKFMVIKSIPKLQGSIHPLPGKAYAGDLRQLVLELRNPSDFPVKNLKMKISHPRFLIIGKQENRKSEFPACLRKRTDAVLSDVYANPNIMSDTVFLFPEGTSVQGEAPFLWPLWFRAAVPGDISLYMSIYYEMGDASSVIKYRTLRLHYNLQVLPSLDVSFQISPSRLRLQEFLVQLDVVNKTSSESFQVYQLSSVGHRWEISLLQAPDTIFPSQSLKAGQAISCFFTLKNSSRFSTLEDNISTLPVRSDVRLVPQSSEDLVYDINSAPLFNFHHYERLQQKVTYEGDLNTVDFVLISRPFKSNDDPGFSNPPHVMSHHACHFSTASTGPISWLVDGPQTLHHDFSASFCEISLKMHIYNSSGSTVFVRIDTLDSAGNGGHMNSVNVVQSATSDNRAGWHDITPVNELKVTSNVLGTQPGKALSLESVPSYIWSGSSSTNLHIDAMSSAEIPLQICVFSPGTYDLSNYVLNWKHPSNGQGDSDETKQHSGKCQGYKYYLTVLQST* 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1711 1291 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 191 524 IPR024420 -
Gso3g1711 1291 PANTHER TRANSPORT PROTEIN TRAPP 10 1290 IPR024420 -
Gso3g1711 1291 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 643 833 IPR013935 -
Gso3g1711 1291 Gene3D Tetratricopeptide repeat domain 335 559 IPR011990 GO:0005515
Gso3g1711 1291 SUPERFAMILY TPR-like 435 556 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1711 Gso-Chr3 42960637 42980846 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1711 K20305 - gmx:100809666 2609.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1680 19 45712938 45731918 Gso3g1711 3 42960637 42980846 GST