Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1654 ATGACGGAAGTGCTTCAGTTGCCTTCATCCTCAAGCTGTTCGCGTCGGCCATGTGGTGGTCTCACACCCAATGATGGGTCGCACCCAATTCCCCTTATTAACGCTCCCACTGTGGAAGAACAACAAAGTGTGGAAATTGAAGAAGAAGAAGAGAAAGAAAGGGAAAGGGAGAGGGATCAGCTTTCTATTTTGACCCTTTTGATTGCTACGTTCAGGAAATCTTTGATTGGGTGCAGCACTACTACATCTTCTTCTTCTTCAATGGAGATTGGGTGGCCTTCCAATGTGAGACACGTGGCACATGTCACCTTCGATCGCTTCCATGGCTTTCTCGGTTTGCCTGTGGAGTTCGAACCAGAAGTTCCCAGGAGACCTCCCAGCGCTAGTGCAAATGTTTTTGGAGTTTCAACAGAATCTATGCAGCTGTCTTTTGATGCCAGAGGAAATAGTGTTCCTACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATTAATGCTGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGCATAGTACCAGATGGCATTGATGTGCACTGCTTAGCAGGTCTCATAAAGGCTTGGTTTAGAGAACTACCAACTGGGGTATTGGACCCTCTTTCGCCAGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCAATAAACTTAATGGCAGATGTTGCTCAAATGGAAAACTTGAACAAGATGAATGCACGCAATATTGCAATGGTTTTTGCTCCAAACATGACTCAAATGGCAGATCCTTTGACTGCTCTGATGTATGCAGTACAAGTCATGAATTTTCTCAAGACTCTTGTGGTGAAGACACTGAGAGAAAGAGAGGAATCTATTGTAAAATCAAATCCTGTTCCAGACCTTAATTCTTTTGACGATGATGGGAACCATAGCAATTCAGAAATGCTTGACAAGGAGGACAGTGAAAATGGAAATGATTGTGGTGATGACGATGAAGATACAGTGTTTGTCACTGCAGAGCCTTCTCAACAAAGCCCTAGTCATCTCACTGAAGATGGCTGTGAAACTGAAACCGAATCCAAAAGTTTGCCTACATCTACTGAGAATTTTATTTCAAGTGGGAATAGGTTGGTGGTTGACAGTTGTCCATGCACTTTTGTATCTCAAATTTGCTCTTTGGCAATTGGACTTCAAGACTGTGGCCTCGCTACCGGGCAGACAAAAGGGGATCAAGCAAAAATTTGCAGGAGCAAAAGCCTTCAGTTGAGTACTTACGATACAGACAAGTGTTCCAGAAAGGTGATTGAGCTTCCAGTAAGCGGAGCTGCAGAGAAGAACTGTGGAATGGCAATTATTGAGCGCATAAATTCGAGAACAGAGTTGGCTGAAGCCTGGCGTTGA 1482 0.4426 MTEVLQLPSSSSCSRRPCGGLTPNDGSHPIPLINAPTVEEQQSVEIEEEEEKERERERDQLSILTLLIATFRKSLIGCSTTTSSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEEFVREQLNRGIVPDGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKTLREREESIVKSNPVPDLNSFDDDGNHSNSEMLDKEDSENGNDCGDDDEDTVFVTAEPSQQSPSHLTEDGCETETESKSLPTSTENFISSGNRLVVDSCPCTFVSQICSLAIGLQDCGLATGQTKGDQAKICRSKSLQLSTYDTDKCSRKVIELPVSGAAEKNCGMAIIERINSRTELAEAWR* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1654 493 CDD RhoGAP 152 307 - -
Gso3g1654 493 CDD CRIB 88 128 - -
Gso3g1654 493 ProSiteProfiles CRIB domain profile. 90 103 IPR000095 -
Gso3g1654 493 MobiDBLite consensus disorder prediction 1 57 - -
Gso3g1654 493 Gene3D CRIB domain 84 119 IPR036936 -
Gso3g1654 493 SMART PBD_5 90 124 IPR000095 -
Gso3g1654 493 Pfam RhoGAP domain 152 286 IPR000198 GO:0007165
Gso3g1654 493 Gene3D Rho GTPase activation protein 123 321 IPR008936 GO:0007165
Gso3g1654 493 MobiDBLite consensus disorder prediction 1 18 - -
Gso3g1654 493 MobiDBLite consensus disorder prediction 364 378 - -
Gso3g1654 493 Pfam P21-Rho-binding domain 89 115 IPR000095 -
Gso3g1654 493 PANTHER MKIAA1688 PROTEIN 1 493 IPR044785 GO:0005096
Gso3g1654 493 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 493 - -
Gso3g1654 493 ProSiteProfiles Rho GTPase-activating proteins domain profile. 135 320 IPR000198 GO:0007165
Gso3g1654 493 MobiDBLite consensus disorder prediction 318 394 - -
Gso3g1654 493 SUPERFAMILY GTPase activation domain, GAP 130 308 IPR008936 GO:0007165
Gso3g1654 493 SMART RhoGAP_3 149 312 IPR000198 GO:0007165
Gso3g1654 493 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1654 Gso-Chr3 42471154 42475135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1654 - - gmx:100783118 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1654 3 42471154 42475135 Gso3g1654 3 42471154 42475135 ECH
Gso19g1630 19 45218911 45223581 Gso3g1654 3 42471154 42475135 GST