Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1630 ATGACGGAAGTGCTTCAGTTGCCTTCATCCTCAAGCTGTTCGCGTCGTCCATGTGGTAGTCTCACACCCAATGATGGGTCGCACCCAATTTCCCTTATTAACGCTCCTCCCACTGTGGAAGATCAAAGGGTGGAAATTGAAGAAGAAGAAGAGAAAGAAAGGGAAAGGGAGAGGGATCAGCTTTCTATTTTGACCCTTTTGATTGCTACGTTCAGGAAATCTTTGATTGGGTGCAGCACCACTACAACTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGAGATTGGGTGGCCTTCCAATGTGAGACACGTGGCACATGTCACCTTTGATCGCTTCCATGGCTTTCTCGGTTTGCCTGTTGAGTTCGAACCCGAAGTTCCCAGGAGACCTCCCAGCGCTAGTGCAAATGTTTTTGGAGTTTCAACAGAATCTATGCAGCTTTCTTTTGATGCCAGAGGGAATAGTGTACCTACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGTCTGCAGGCTGAAGGAATCTTCAGAATTAATGCTGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGTGTAGTACCAGATGGCATTGATGTGCACTGCTTGGCAGGTCTCATAAAGGCTTGGTTTAGAGAACTACCAACTGGAGTATTGGACCCTCTTTTGCCAGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCAATAAACTTAATGGCAGATGTTGCTCAAATGGAAAACTTGAACAAGATGAATGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCAAATGGCAGATCCTTTGACTGCTTTGATGTATGCAGTACAAGTCATGAATTTTCTCAAGACTCTTGTTGTGAAGGCATTGAGAGAAAGAGAGGAATCTATTGTAAAATCAAATCCTGTTCCTGACCTTAATTCTTTTGACGATGATGGGAACCATAGCAATTCAGAAATGCTTGACAAGGAGGACAGTGAAAATGGAAATGATTGTAGCGATGACGATGAAGATACAGTGTTTGTCACTGCAGAGCCTTCTCAACAAAGCCCTAGTCATCTTACAGAAGATGGTTGTGAAACTGAAACCGCGACCAAATCCAAAAGTTTGCCAGCATCTACTGAGAACTATATTTCAAGTGGAAATAGGTTGCTGGTTGACAGTTGTCCTTGCAATCTTGTATCTCAAATTTGCTCTTTGGCAATTGGACTTCAAGACTGTGGCCTCGCTACCGGGCAGACAAAGGGGGATCAAGCAAAAATTTGCAGGAGCAAAAGCCTTCAGTTGAGCACTTATGACACGGACAAGTGTTCCAGAAAGGTGATTCAGCTTCCAGTAACCGGAGCTGCAGAGAAGAACCTTGGAATGGCAATTATTGAGCGTATAAATTCGAGAACGGAGTTGGCTGAAGCTTGGCGTTGA 1503 0.4398 MTEVLQLPSSSSCSRRPCGSLTPNDGSHPISLINAPPTVEDQRVEIEEEEEKERERERDQLSILTLLIATFRKSLIGCSTTTTSSSSSSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEEFVREQLNRGVVPDGIDVHCLAGLIKAWFRELPTGVLDPLLPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKALREREESIVKSNPVPDLNSFDDDGNHSNSEMLDKEDSENGNDCSDDDEDTVFVTAEPSQQSPSHLTEDGCETETATKSKSLPASTENYISSGNRLLVDSCPCNLVSQICSLAIGLQDCGLATGQTKGDQAKICRSKSLQLSTYDTDKCSRKVIQLPVTGAAEKNLGMAIIERINSRTELAEAWR* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1630 500 SMART RhoGAP_3 154 317 IPR000198 GO:0007165
Gso19g1630 500 Gene3D Rho GTPase activation protein 128 326 IPR008936 GO:0007165
Gso19g1630 500 Pfam P21-Rho-binding domain 94 120 IPR000095 -
Gso19g1630 500 MobiDBLite consensus disorder prediction 328 400 - -
Gso19g1630 500 MobiDBLite consensus disorder prediction 369 400 - -
Gso19g1630 500 ProSiteProfiles Rho GTPase-activating proteins domain profile. 140 325 IPR000198 GO:0007165
Gso19g1630 500 PANTHER MKIAA1688 PROTEIN 1 500 IPR044785 GO:0005096
Gso19g1630 500 SMART PBD_5 95 129 IPR000095 -
Gso19g1630 500 SUPERFAMILY GTPase activation domain, GAP 135 313 IPR008936 GO:0007165
Gso19g1630 500 Coils Coil 39 59 - -
Gso19g1630 500 Gene3D CRIB domain 89 124 IPR036936 -
Gso19g1630 500 MobiDBLite consensus disorder prediction 1 31 - -
Gso19g1630 500 MobiDBLite consensus disorder prediction 1 58 - -
Gso19g1630 500 CDD RhoGAP 157 312 - -
Gso19g1630 500 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 500 - -
Gso19g1630 500 CDD CRIB 93 133 - -
Gso19g1630 500 Pfam RhoGAP domain 157 291 IPR000198 GO:0007165
Gso19g1630 500 ProSiteProfiles CRIB domain profile. 95 108 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1630 Gso-Chr19 45218911 45223581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1630 - - gmx:121172725 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1630 19 45218911 45223581 Gso3g1654 3 42471154 42475135 GST