Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1650 ATGTCGGGGAAGCGAAAGAGGAAGTTGAAATTGTTAAGCGATGCAATCACAGATAATAGAAGAAAAACAGTTGCTGAGGTGAAAACTGAAAATTTGGAGCTGCAATCCTGGGCTGATCTCCCTGCTGAACTCTTAGAATCGATCTTGTCCCGATTGATTCTAGTGGATAACATCCGGGCTTCTTCTGTTTGCAAGAGATGGCATTCTGTTGCCAGTGATGTACGTGTAGTAAACCAATCACCATGGCTTATGTATTTTCCAAAATTCGGTGACTGTTATGAATTCTATGACCCTGTGCAGCATAAGACACTCACCTTCGAGTTGCCAGAGTTGAATGGCTCTAGAGTTTGTTATACAAAAGATGGTTGGTTATTGCTATACCGGCCCAGAACTCACCGAGTATTCTTCTTTAATCCCTTTACTCGGGAGCTGATCAAACTGCCAAGATTTGAGATGACATACCAGATTGTGGCCTTCTCTTGTGCTCCAACATCACCTGGCTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTAGCTATTAGCACTTGTTATCCTGGGGCAACAGAATGGACCACTGTTAATTACCAAAACCGCTTGCCCTTTGTCAGTAGCATTTGGAATAAGCTTGTGTTTTGTAATGGGCTATTTTATTGTCTGAGCCTCACAGGTTGGCTTGGTGTGTTTGATCCAGTTGAATGTACTTGGAGTGTTCTGGCAGTACCTCCACCCAAATGCCCAGAGAACTTTTTTGCCAAAAACTGGTGGAAGGGAAAATTTATGGCAGAGCATGAAGGAGATATATTAGTAATTTATACATGCTGTAGTGAAAATCCCATTATTTTTAAGTTAGATCAGACATTAATGAAATGGGAAGAGATGACAACACTAGATGGGGTAACTCTTTTTGCTAGTTTTTTGTCATCTCATTCAAGGACTGACCTCATTGGAATAATGAGGAACAGTGTCTACTTCTCCAAAGTTCGTTTCTATGGAAAGCGTTGCATATCATTCTCTCTTGGTGACTATAGATACTATCCCCGTAAACAGTGTCATGACTGGGGAGAGCACGACCCTTTTGAGAACATCTGGATTGAGCCACCAAAGGACTTTTCAGCTTGCATGTGA 1134 0.4171 MSGKRKRKLKLLSDAITDNRRKTVAEVKTENLELQSWADLPAELLESILSRLILVDNIRASSVCKRWHSVASDVRVVNQSPWLMYFPKFGDCYEFYDPVQHKTLTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECTWSVLAVPPPKCPENFFAKNWWKGKFMAEHEGDILVIYTCCSENPIIFKLDQTLMKWEEMTTLDGVTLFASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLGDYRYYPRKQCHDWGEHDPFENIWIEPPKDFSACM* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1650 377 ProSiteProfiles F-box domain profile. 34 85 IPR001810 GO:0005515
Gso3g1650 377 Pfam F-box-like 37 73 IPR001810 GO:0005515
Gso3g1650 377 SUPERFAMILY F-box domain 32 127 IPR036047 GO:0005515
Gso3g1650 377 PANTHER OS09G0392200 PROTEIN 7 373 IPR044619 -
Gso3g1650 377 Gene3D - 30 78 - -
Gso3g1650 377 SMART fbox_2 40 80 IPR001810 GO:0005515
Gso3g1650 377 PANTHER OS09G0392200 PROTEIN 7 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1650 Gso-Chr3 42446338 42450208 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1650 - - gmx:100782045 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1650 3 42446338 42450208 Gso3g1650 3 42446338 42450208 ECH
Gso19g1624 19 45185565 45194217 Gso3g1650 3 42446338 42450208 GST