Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1624 ATGTCGGGGAAGAGAAAGAGGAAGTTGAAATTGTTAAGCGATGCAATCACAGATAATAGAAGAACAGTTGCTGAGGTGAAAAGTGAAAATTTGGAGATGCAATCCTGGGCTGATCTCCCTGCTGAACTCTTAGAATCGATCTTGTCCCGATTGATCCTAGCGGATAACATCCGTGCTTCTGCTGTTTGCAGGAGATGGCATTCTGTTGCCAGTGATGTACGTGTAGTAAACCAATCACCATGGCTTATGTATTTTCCAAAATTCGGTGACTGTTATGAATTCTATGACCCTGTGCAGCGTAAGACACACACCTTCGAGTTGCCAGAGTTGAATGGATCTAGAGTTTGTTATACAAAAGATGGTTGGTTATTGCTATACCGGCCCAGAACTCACAGAGTATTCTTCTTTAATCCCTTTACTCGGGAGCTGATCAAACTGCCAAGATTTGAGATGACATACCAGATTGTGGCCTTCTCTTGTGCTCCAACATCACCTGGCTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTAGCTATTAGCACTTGTTATCCTGGGGCAACAGAATGGACCACTGTTAATTACCAAAACCGCTTGCCCTTTGTCAGTAGCATTTGGAATAAGCTTGTGTTTTGTAATGGGCTATTTTATTGTCTGAGCCTCACTGGTTGGCTTGGGGTGTTTGACCCAGTAGAATGTACTTGGAGTGTTCTGGCAGTACCTCCACCCAAATGCCCAGAGAACTTTTTTGCCAAAAACTGGTGGAAGGGAAAATTTATGACTGAGCATGAAGGAGATATATTAGTAATTTATACATGCTGTAGTGAAAACCCCATTATTTTTAAGTTAGATCAGACATTAATGAAATGGGAAGAGATGACAACACTAGATGGAGTAACTCTTTTTGCTAGTTTTTTGTCATCTCATTCAAGGACTGACCTCATTGGAATAATGAGGAACAGTGTCTACTTCTCCAAAGTTCGTTTCTATGGTAAGCGTTGCATTTCATTCTCTCTTGATGACTATAGATACTATCCCCGTAAACAGTGTCATGACTGGGGAGAACAAGACCCTTTTGAGAACATCTGGATTGAGCCACCAAAGGACTTTTCTGCTTGCATGTGA 1131 0.4164 MSGKRKRKLKLLSDAITDNRRTVAEVKSENLEMQSWADLPAELLESILSRLILADNIRASAVCRRWHSVASDVRVVNQSPWLMYFPKFGDCYEFYDPVQRKTHTFELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECTWSVLAVPPPKCPENFFAKNWWKGKFMTEHEGDILVIYTCCSENPIIFKLDQTLMKWEEMTTLDGVTLFASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLDDYRYYPRKQCHDWGEQDPFENIWIEPPKDFSACM* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1624 376 PANTHER OS09G0392200 PROTEIN 6 372 IPR044619 -
Gso19g1624 376 Gene3D - 35 75 - -
Gso19g1624 376 SMART fbox_2 39 79 IPR001810 GO:0005515
Gso19g1624 376 Pfam F-box-like 36 72 IPR001810 GO:0005515
Gso19g1624 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
Gso19g1624 376 SUPERFAMILY F-box domain 29 123 IPR036047 GO:0005515
Gso19g1624 376 PANTHER OS09G0392200 PROTEIN 6 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1624 Gso-Chr19 45185565 45194217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1624 - - gmx:100796538 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1624 19 45185565 45194217 Gso3g1650 3 42446338 42450208 GST