Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1646 ATGTTACTCTTTGCAACACTTCTTCTCTTTTCTCTGCAATCGAGTATCTTAACACCGATTCCAGTAAAACCCACTAAACACTCTTCGAATCTCTCCGTCACCAACTCCGCCTCTTACGGCGAGAGAATCAGCAGTAGCACGCGCCGGAGAACCATTTCACCCTTCGAATCCCGAATCTCACTCATTTTCGCCCTCGCTCCTCAAGCCAACACTCTCTCCCAGCGACTTCTAGCGGACGTGGCTGCCGAGACTGCGAAATACGTGTTTCCGAAGAGATTTGAAAACCGCAATCTCGAGGAGGCGTTGATGAGTGTTCCGAACCTTGAGACTGTCGAGTTCAAAGTTCTGAGTAGAAGGGACCAGTATGAGATTAGGGAAGTCGAGCCTTACTTTGTGGCAGAGACAACAATGCCTGGAAAGAGTGGGTTTGATTTCAATGGTGCTTCTCGGTCCTTCAATGTTCTGGCTGAGTACCATTTTGGTAAGAATACAACTAAAGAGAAAATGGAGATGAATACACCTGTTTTCACAAGTAAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCTGTGTTAACAACAAAGATGGAAGATCAAGATAATTGGAAAATGTCTTTTGTCATGCCATCAAAGTATGGAGCTAACTTGTCACTGGCTAAAGATTCCTCTGTGAGGATTAAAGAGGTGCCCAGAAAAATAATTGATGTAGTTTCCTTTTCAGGCATAGATATTGGCAAGCAATGTATGCTGAAGGGATAA 765 0.4392 MLLFATLLLFSLQSSILTPIPVKPTKHSSNLSVTNSASYGERISSSTRRRTISPFESRISLIFALAPQANTLSQRLLADVAAETAKYVFPKRFENRNLEEALMSVPNLETVEFKVLSRRDQYEIREVEPYFVAETTMPGKSGFDFNGASRSFNVLAEYHFGKNTTKEKMEMNTPVFTSKNQSDGVKMDMTTPVLTTKMEDQDNWKMSFVMPSKYGANLSLAKDSSVRIKEVPRKIIDVVSFSGIDIGKQCMLKG* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1646 254 Pfam SOUL heme-binding protein 108 177 IPR006917 -
Gso3g1646 254 Pfam SOUL heme-binding protein 179 244 IPR006917 -
Gso3g1646 254 PANTHER HEME-BINDING PROTEIN-RELATED 18 243 IPR006917 -
Gso3g1646 254 SUPERFAMILY Probable bacterial effector-binding domain 103 178 IPR011256 -
Gso3g1646 254 Gene3D Regulatory factor, effector binding domain 181 249 IPR011256 -
Gso3g1646 254 Gene3D Regulatory factor, effector binding domain 107 180 IPR011256 -
Gso3g1646 254 PANTHER OS02G0533200 PROTEIN 18 243 - -
Gso3g1646 254 SUPERFAMILY Probable bacterial effector-binding domain 180 244 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1646 Gso-Chr3 42406667 42415016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1646 - - gmx:121174611 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1646 3 42406667 42415016 Gso3g1646 3 42406667 42415016 ECH
Gso19g1620 19 45146552 45150029 Gso3g1646 3 42406667 42415016 GST