Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1620 ATGTTTACTATTTGCAACCCCTCTTCTCTTTCTCGGCAACCGGGTATCGTGGCTCCGATTCCGGTAAAACCTATCAAACACTCTTCGAATCTCTCTGTCACCAACTCCGCCTCTTCCGGCGAGAGAATCAGCAGTAGCACCAGGCGAAGAACCATTTCACCCTTCGAATCCCGAATCTCACTCATCTTCGCCCTCGCTTCTCAAGCCAACTCTCTCTCCCAGCGACTTCTAGCGGACGTGGCTGCCGAGACTGCGAAATACGTGTTTCCGAAGAGATTTGAAAGCCGCAATCTTGAGGAGGCGTTGATGAGTGTTCCGGACCTTGAGACTGTCGACTTCAAAGTTCTGAGCAGAATGGACCAGTATGAGATTAGGGAAGTCGAGCCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTCAATGGTGCTTCTCGTTCCTTTAATGCTCTAGCTGAGTACCTTTTCGGTAAGAATACAACTAAGGAGAAGATGGAGATGACTACACCTGTTTTCACAAGTAAGAATCAATCTGATGGGGTTAAAATGGACATGACAACTCCTGTGTTAACAACAAAGATGGAAGATCAAGATAATTGGAAAATGTCTTTTGTCATGCCATCAAAGTATGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGAGGATTAAAGAGGTGCCCAGAAAAATAGTTGCTGTAGTTTCCTTTTCAGGTTTTGTGAATGATGAAGAAATTAAGCAGCGTGAATTGAAACTACGAGATGCATTAAAAAGTGACAGTCAATTTGAAATTAAAGAGGGAACTTCAGTAGAAGTTGCACAGTATAATCCACCATTTACTCTTCCATTTCAACGCCGTAATGAAATTGCATTGGAGGTGGAATGGAAAAATAAATAG 912 0.4364 MFTICNPSSLSRQPGIVAPIPVKPIKHSSNLSVTNSASSGERISSSTRRRTISPFESRISLIFALASQANSLSQRLLADVAAETAKYVFPKRFESRNLEEALMSVPDLETVDFKVLSRMDQYEIREVEPYFVAETTMPGKSGFDFNGASRSFNALAEYLFGKNTTKEKMEMTTPVFTSKNQSDGVKMDMTTPVLTTKMEDQDNWKMSFVMPSKYGANLPLPKDSSVRIKEVPRKIVAVVSFSGFVNDEEIKQRELKLRDALKSDSQFEIKEGTSVEVAQYNPPFTLPFQRRNEIALEVEWKNK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1620 303 Gene3D Regulatory factor, effector binding domain 182 303 IPR011256 -
Gso19g1620 303 Gene3D Regulatory factor, effector binding domain 107 181 IPR011256 -
Gso19g1620 303 PANTHER HEME-BINDING PROTEIN-RELATED 26 302 IPR006917 -
Gso19g1620 303 PANTHER OS02G0533200 PROTEIN 26 302 - -
Gso19g1620 303 Pfam SOUL heme-binding protein 108 177 IPR006917 -
Gso19g1620 303 Pfam SOUL heme-binding protein 179 296 IPR006917 -
Gso19g1620 303 SUPERFAMILY Probable bacterial effector-binding domain 179 298 IPR011256 -
Gso19g1620 303 SUPERFAMILY Probable bacterial effector-binding domain 103 178 IPR011256 -
Gso19g1620 303 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1620 Gso-Chr19 45146552 45150029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1620 - - gmx:100797412 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1620 19 45146552 45150029 Gso3g1646 3 42406667 42415016 GST