Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1633 ATGGCCAATAAAGAGTTCAAGGTCCCGCCGGTGGCTTTCCCCTCCGCCGGCAACCCCGCCGCGGCGGGTCCAAACCTCCAGCAGCGGCGCATGCCCACGCCGCCGTTCCAGCCGAACTCCGGTATCCCCTTCATGTCCTTCGACATAGGCTCCGCCGCGGCGTCCACCTCCTCGGGGCCGATCTACACCGGCCCCGCCGTGGGCCCCGGCGGCTCCGCCAACTTCGACGACGAGGAACCCCTCCTCGACGAGCTCGGGATCCACCCCGACCAAATCTGGAGCAAAATCAGATCCGTTCTGAACCCTTTCCGCGTCAACCACACTGTCCACAAAGATTCGGATCTCTCGGGCCCAATTCTTCTCTACATGTCCTTCTGCCTCTTCCAATTACTCGCCGGGAAGATCCAATTCGGCGTCATCTTGGGCTGGATCGTGGTCTCCTCCATCTTCTTATACGTCGTCTTCAACATGCTAGCCGGTCGAACCGGTAACCTCGATCTCCACACCTGCACCAGCGTCGTCGGTTACTGCCTCTTGCCGGTCGTCATTTTCTCTGCCCTCTCGCTCTTCTTACCGGTCGATGGGGTCATTCGCCTCTCGGTCGCCTCGGTTTTCGTCTTGTGGGCCACCAGGGCCTCCGCCGGACTCGTCGTTTCGCTCGCCGATGGCGGTGACGAACACCGTGGACTCATTGCGTACGCATCTTTCTTGATTTACACTCTGTTTTCGTTGCTTGTCATATTCTAG 747 0.5984 MANKEFKVPPVAFPSAGNPAAAGPNLQQRRMPTPPFQPNSGIPFMSFDIGSAAASTSSGPIYTGPAVGPGGSANFDDEEPLLDELGIHPDQIWSKIRSVLNPFRVNHTVHKDSDLSGPILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCLLPVVIFSALSLFLPVDGVIRLSVASVFVLWATRASAGLVVSLADGGDEHRGLIAYASFLIYTLFSLLVIF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1633 248 Pfam Yip1 domain 127 246 IPR006977 GO:0016020
Gso3g1633 248 PANTHER PROTEIN YIPF 4 248 - -
Gso3g1633 248 PANTHER GOLGI MEMBRANE PROTEIN YIP1 4 248 IPR045231 GO:0006888
Gso3g1633 248 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1633 Gso-Chr3 42324187 42325265 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1633 K20363 - gmx:100775605 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1633 3 42324187 42325265 Gso3g1633 3 42324187 42325265 ECH
Gso19g1610 19 45067679 45068816 Gso3g1633 3 42324187 42325265 GST