Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1610 ATGACTAATAAAGAGTTCAAAGTCCCGCCGGTTGCGTTCCCCTCCGCCGGCAACCCCGCCTCGGCGGGTCCAAACCTCCAGCAGCGGCGCATGCCCACGCCGCCGTTCCAGCCGAATTCCGGCATCCCCTTCATGTCCTTCGACATAGGCTCCGCCGCGGCGTCCACCTCCTCGGGGCCGATCTACACCGGCCCCGCCGTGGGCGCCGGCGGCTCCGCCAACTTCGACGACGAGGAGCCCCTCCTCGACGAGCTCGGGATCCACCCCGACCAAATCTGGAGCAAAATCAGATCGGTTCTGAACCCCTTCCGCGTCAATCACACGGTCCACAAAGATTCGGATCTATCGGGACCAATTCTTCTCTACATGTCCTTCTGCCTCTTCCAATTACTCGCTGGGAAGATCCAATTCGGCGTGATCTTGGGCTGGATCGTGGTCTCCTCCATCTTCTTATACGTCGTCTTCAACATGCTCGCCGGTCGAACCGGTAACCTCGATCTCCACACCTGCACCAGCGTCGTCGGTTACTGCTTGCTGCCGGTCGTCATTTTCTCTGCCCTCTCGCTCTTCTTACCGGTCGACGGGGTCATTCGCCTCTCAGTCGCCGCGGTCTTCGTCTTGTGGGCCACCAGGGCCTCCGCGGGACTCGTCGTTTCGCTCGCCGATGGCGGTGACGAACACCGTGGACTCATTGCATACGCGTCTTTCTTGATTTACACTCTGTTTTCGTTGCTTGTCATATTCTAG 747 0.5957 MTNKEFKVPPVAFPSAGNPASAGPNLQQRRMPTPPFQPNSGIPFMSFDIGSAAASTSSGPIYTGPAVGAGGSANFDDEEPLLDELGIHPDQIWSKIRSVLNPFRVNHTVHKDSDLSGPILLYMSFCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCLLPVVIFSALSLFLPVDGVIRLSVAAVFVLWATRASAGLVVSLADGGDEHRGLIAYASFLIYTLFSLLVIF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1610 248 MobiDBLite consensus disorder prediction 20 35 - -
Gso19g1610 248 Pfam Yip1 domain 127 246 IPR006977 GO:0016020
Gso19g1610 248 PANTHER PROTEIN YIPF 4 248 - -
Gso19g1610 248 MobiDBLite consensus disorder prediction 1 37 - -
Gso19g1610 248 PANTHER GOLGI MEMBRANE PROTEIN YIP1 4 248 IPR045231 GO:0006888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1610 Gso-Chr19 45067679 45068816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1610 K20363 - gmx:100791279 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1610 19 45067679 45068816 Gso3g1633 3 42324187 42325265 GST