Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1632 ATGAAGATGCAAATGCGCGTGCCAGGGTTCTTGTTGTTCTTGCTAACCATCGGAATCTTCGAAGTCGATGCCGTTTATGGTTACGTTCGACCACCACCTCGTAAAACACTTTTTGTTCCACATGCAAATCAGGATTCCCACTCGCCTCAACAGGTACACATATCTCAAGTGGGCCAAAACAAGATGAGGATATCATGGATCACAGATAGCCCAACTCCTGCAAAGGTTTCGTATGGTCCATCTCCTTCGGTTAATGCATCCTCTGCCATAGGAACTACCTCCTCGTACCGTTATCTGGTCTACGAGTCTGGTGAAATTCACAACGTGGTAATTGGTCCCCTCAACCCCAACACTGTCTACTATTACCGTTTGGGTGACCCACCCTCTTCCCAAACATACAACTTTAAGACTCCACCATCCCAACTTCCTATCAAATTTGCAGTAGTTGGAGATCTTGGACAAACGGATTGGACCAGATCAACCTTGGAGCATGTGAATAAGTCAAACTATGACATGTTGTTACTGCCTGGTGATCTATCCTACGCAGACTTCATCCAAGATCTATGGGACTCCTTTGGTCGATTGGTTGAACCATTAGCTAGCCAACGTCCTTGGATGGTAACCCAAGGCAACCACGAGGTTGAGATGATTCCACTGATTCACACAACACCATTCACGGCATACAATGCTAGGTGGCTCATGCCATTCCAAGAAAGTGGATCAAACTCAAATCTCTACTATTCTTTCGATGTGGCTGGCGTTCATGTCATCATGCTTGGCTCTTACACTGACTTTGACTCTTCTTCTCCACAATACAAATGGCTTCAAAATGACTTGCAGAAGGTAAATAGAAGAATAACTCCTTGGGTTGTAGTATTGATTCATGCCCCGTGGTACAACTCCAACACCGCTCATCAAGGTGAGCCTGAATCCGTAAACATGAAGGCTTCCATGGAAGATTTGCTCTATCAAGCCCGCGTTGATGTTGTTTTTGAAGGACATGTGCATGCCTATGAGCGCTTTACACGGGTTTATAAAGACAAAGCTAACAATTGTGCTCCGATGTACATCACAATCGGAGATGGGGGAAACCGTGAAGGCCTTGCTACTAAGTACATAAATCCCAAGCCAACAATATCAATATTCAGGGAGGCTAGCTTTGGACACGGTACTTTGGAGGTATTTAATGTATCTCATGCACGCTGGACCTGGCATAAGAATGATAACGATGAAGCAGTTATTAGTGATTTTGTGTGGCTTACAAGTTTTTCCTCTAATCCTTCTTGTAAATAG 1293 0.4447 MKMQMRVPGFLLFLLTIGIFEVDAVYGYVRPPPRKTLFVPHANQDSHSPQQVHISQVGQNKMRISWITDSPTPAKVSYGPSPSVNASSAIGTTSSYRYLVYESGEIHNVVIGPLNPNTVYYYRLGDPPSSQTYNFKTPPSQLPIKFAVVGDLGQTDWTRSTLEHVNKSNYDMLLLPGDLSYADFIQDLWDSFGRLVEPLASQRPWMVTQGNHEVEMIPLIHTTPFTAYNARWLMPFQESGSNSNLYYSFDVAGVHVIMLGSYTDFDSSSPQYKWLQNDLQKVNRRITPWVVVLIHAPWYNSNTAHQGEPESVNMKASMEDLLYQARVDVVFEGHVHAYERFTRVYKDKANNCAPMYITIGDGGNREGLATKYINPKPTISIFREASFGHGTLEVFNVSHARWTWHKNDNDEAVISDFVWLTSFSSNPSCK* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1632 430 Pfam Purple acid Phosphatase, N-terminal domain 49 137 IPR015914 GO:0003993|GO:0046872
Gso3g1632 430 CDD MPP_PAPs 143 422 IPR041792 -
Gso3g1632 430 Gene3D - 48 140 - -
Gso3g1632 430 SUPERFAMILY Metallo-dependent phosphatases 143 417 IPR029052 -
Gso3g1632 430 SUPERFAMILY Purple acid phosphatase, N-terminal domain 37 139 IPR008963 GO:0003993|GO:0046872
Gso3g1632 430 Gene3D - 141 428 IPR029052 -
Gso3g1632 430 PANTHER PURPLE ACID PHOSPHATASE 22 428 - -
Gso3g1632 430 Pfam Iron/zinc purple acid phosphatase-like protein C 353 414 IPR025733 -
Gso3g1632 430 Pfam Calcineurin-like phosphoesterase 145 338 IPR004843 GO:0016787
Gso3g1632 430 PANTHER ACID PHOSPHATASE RELATED 22 428 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1632 Gso-Chr3 42305071 42309361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1632 49 392 Miscellaneous Gene Families AT1G13900 26.128 7.11e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1632 K22390 - gmx:100794764 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1632 3 42305071 42309361 Gso3g1632 3 42305071 42309361 ECH
Gso19g1609 19 45048828 45052135 Gso3g1632 3 42305071 42309361 GST