Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1609 ATGGGGATGCGAATGCGTGTGCCAGGATTCATGCTTTTGCTAATCATCGGAATCTTCGAACTCGATGCTGTTTATGGTTACGTTCGACCACCACCTCGTAAAACACTCTTTGTTCCACATGCAGATCAGGATTCCCACTCGCCTCAACAGGTACACATATCTCAAGTGGGCCAAAACAAGATGAGGATATCATGGATCACAGACAGCCCAACTCCTGCAAAGGTTATGTACGCTCCATCTCCTTCAGGTAATACAGTCTCTGCCACAGGAACTACCTCTTCGTATCGTTATCTGGTCTACGAGTCTGGTGAAATTCACAACGTCGTAATTGGTCCCCTCAACCCCAACACTGTCTACTACTACCGTTTGGGTGACCCACCTTCTTCCCAAACATACAACTTTAAGACTCCACCCTCCCAACTTCCAATCAAATTTGCAATAGTTGGAGATCTTGGACAAACAGATTGGACCAAGTCAACTTTGGAGCATGTGAAGAAGTCAAACTACGACATGTTGTTATTGCCTGGTGATCTATCCTACGCAGACTTCAACCAAGATCTATGGGACTCCTTTGGTCGATTAGTTGAACCATTAGCTAGCCAACGTCCTTGGATGGTCACCCAAGGCAACCACGAGGTCGAGACGATTCCATTGCTTCACAAAACACCATTCACAGCCTACAATGCTAGGTGGCTCATGCCATTCCAAGAAAGTGGATCAAACTCTAATCTTTATTATTCTTTCGATGTGGCTGGTGTTCATGTCATCATGCTTGGCTCCTACACTGACTTTGACCCTTCTTCTCCACAATACAAATGGCTTCAAAATGACTTGCAAACGGTAAACAAGAGAACAACTCCTTGGATTGTAGTATTGATTCACGCCCCGTGGTACAACTCTAACACTGCTCATCAAGGTGAGCCTGAATCCATTAACATGAAGGTTGCCATGGAAGATTTGCTCTATCAAGCCCGCGTTGATGTTGTTTTTGCAGGGCATGTTCATGCCTATGAGCGTTTTACACGTGTTTATAAAGACAAGGCTAACAATTGTGCTCCGATGTACATCACAATCGGAGATGGGGGAAATCGTGAAGGCCTTGCTACTAAGTACATGGATCCCAAGCCAACGATATCAATATTCAGGGAGGCTAGCTTTGGACATGGTACGTTAGAAGTATTTAACGTATCTCATGCACGCTGGACCTGGCATAAGAATGATAACGATGAAGCAGTTGATAGTGATTTTGTGTGGCTTACAAGTTTCTCCTCTATTCCTTCCTGTAAATAG 1290 0.4465 MGMRMRVPGFMLLLIIGIFELDAVYGYVRPPPRKTLFVPHADQDSHSPQQVHISQVGQNKMRISWITDSPTPAKVMYAPSPSGNTVSATGTTSSYRYLVYESGEIHNVVIGPLNPNTVYYYRLGDPPSSQTYNFKTPPSQLPIKFAIVGDLGQTDWTKSTLEHVKKSNYDMLLLPGDLSYADFNQDLWDSFGRLVEPLASQRPWMVTQGNHEVETIPLLHKTPFTAYNARWLMPFQESGSNSNLYYSFDVAGVHVIMLGSYTDFDPSSPQYKWLQNDLQTVNKRTTPWIVVLIHAPWYNSNTAHQGEPESINMKVAMEDLLYQARVDVVFAGHVHAYERFTRVYKDKANNCAPMYITIGDGGNREGLATKYMDPKPTISIFREASFGHGTLEVFNVSHARWTWHKNDNDEAVDSDFVWLTSFSSIPSCK* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1609 429 Pfam Calcineurin-like phosphoesterase 144 337 IPR004843 GO:0016787
Gso19g1609 429 Pfam Iron/zinc purple acid phosphatase-like protein C 352 414 IPR025733 -
Gso19g1609 429 SUPERFAMILY Metallo-dependent phosphatases 142 412 IPR029052 -
Gso19g1609 429 PANTHER PURPLE ACID PHOSPHATASE 11 427 - -
Gso19g1609 429 SUPERFAMILY Purple acid phosphatase, N-terminal domain 34 138 IPR008963 GO:0003993|GO:0046872
Gso19g1609 429 PANTHER ACID PHOSPHATASE RELATED 11 427 IPR039331 GO:0003993
Gso19g1609 429 CDD MPP_PAPs 142 421 IPR041792 -
Gso19g1609 429 Pfam Purple acid Phosphatase, N-terminal domain 48 136 IPR015914 GO:0003993|GO:0046872
Gso19g1609 429 Gene3D - 47 139 - -
Gso19g1609 429 Gene3D - 140 427 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1609 Gso-Chr19 45048828 45052135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1609 48 388 Miscellaneous Gene Families AT2G03450 25.061 1.15e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1609 K22390 - gmx:100790228 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1609 19 45048828 45052135 Gso3g1632 3 42305071 42309361 GST