Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1631 ATGTATTCCATCTCATGCTGTGTATCTACCGCAACCCCATTATATAACAGGCCCTCCTCCGTATTCAAAATGATGCCTTTCACTCCCAGAAACAAATTGCTACAATCAACAAGTAATCCAACCCAAAATAACAACAACATGATGGGAAAATGTAGCAAGTCCCTTATGGCGTTCCCAATCCTCCTACACACCCTATGCTTCCTTTTGTTCCCACAACCACTACTTTCTCAGGAGAATTTTGTTCGTCAACCAGCTGGCCAACTCATCATCACTCCCCACCATGGCTCCCATTCAGACCCCCAACAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTGTCGTGGATAACCGAAGACAAGCACACAGAATCTGTGGTGGAGTACGGAACAAAGGCAGGGGAATATAGAGAAAAAGCAACGGGGTTGCATACCTCGTACCAATATTTTTTGTATAACTCCGGCAAGATACACAACGTTGTAATTGGGCCTTTGCAGCCAGGCACGACTTACTTCTACAGGTGCGGAGGGTCGGGCCCTGACTTTTCCTTCAAGACACCTCCACCCAAGTTTCCCATTGAATTCGTCATCGTTGGGGACTTGGGACAAACAGAATGGACTGCATCAACCTTAAAACACGTTGACAGCAACGACTATGACGTGTTCTTGTTACCAGGAGACCTATCTTATGCAGATTCCCAACAACCTTTGTGGGACTCTTTTGGTCGTTTGGTGGAGCCATATGCTAGTAAAAGGCCATGGATGGTTACAGAAGGCAACCACGAGATTGAGAGTTTCCCCATTATCTACCCACAAGGCTTCCAAGCCTACAATGCTCGCTGGCCCATGCCCTTCCAACAAAGTGGCTCCACCTCAAACCTCTATTACTCCTTCGAGGTTACTGCCACCCACTTCATCATGCTAGGTTCCTACACTGATTTTGACGCTCAATCACAACAATACACGTGGCTTCAATCTGACCTCGCCAACATTGATAGGGCCAAGACACCTTGGGTGATTGTGTTGTTGCATGCACCTTGGTATAACACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAGGAGTTGCTTTATGAGGCACGCGTTGACTTGGTTTTTGCTGGCCATGTTCATGCTTATGAGCGCTTCACTCGAATTTACGATAATAAGGCTGATTCATGTGGACCAATGTACGTGACAATTGGGGACGGAGGAAATCGGGAAGGCCTTGCGTTAATGTTTAAGAACCCTCCGAGCCCGCTCTCATTGTATCGAGAGCCAAGCTTTGGACATGGAAGGTTGCGAATACTAAATGAAACACATGCACATTGGTCATGGCACCGAAACAATGATGCTGATGCGTTTGTAGCTGATGGTGTTTGGATAGAGAGTTTAAGCAGCTCGAAAGCATGCTCGAAGACACCAGACCAACAAGATGCTGCTAACGAAGAGCTATAA 1476 0.4688 MYSISCCVSTATPLYNRPSSVFKMMPFTPRNKLLQSTSNPTQNNNNMMGKCSKSLMAFPILLHTLCFLLFPQPLLSQENFVRQPAGQLIITPHHGSHSDPQQVHISLVGKEKMRVSWITEDKHTESVVEYGTKAGEYREKATGLHTSYQYFLYNSGKIHNVVIGPLQPGTTYFYRCGGSGPDFSFKTPPPKFPIEFVIVGDLGQTEWTASTLKHVDSNDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIESFPIIYPQGFQAYNARWPMPFQQSGSTSNLYYSFEVTATHFIMLGSYTDFDAQSQQYTWLQSDLANIDRAKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYEARVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGNREGLALMFKNPPSPLSLYREPSFGHGRLRILNETHAHWSWHRNNDADAFVADGVWIESLSSSKACSKTPDQQDAANEEL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1631 491 Gene3D - 99 190 - -
Gso3g1631 491 CDD FN3 98 175 IPR003961 GO:0005515
Gso3g1631 491 Pfam Purple acid Phosphatase, N-terminal domain 100 187 IPR015914 GO:0003993|GO:0046872
Gso3g1631 491 Pfam Calcineurin-like phosphoesterase 196 386 IPR004843 GO:0016787
Gso3g1631 491 CDD MPP_PAPs 190 470 IPR041792 -
Gso3g1631 491 Pfam Iron/zinc purple acid phosphatase-like protein C 401 457 IPR025733 -
Gso3g1631 491 PANTHER PURPLE ACID PHOSPHATASE 34 482 - -
Gso3g1631 491 SUPERFAMILY Metallo-dependent phosphatases 193 457 IPR029052 -
Gso3g1631 491 Gene3D - 191 479 IPR029052 -
Gso3g1631 491 PANTHER ACID PHOSPHATASE RELATED 34 482 IPR039331 GO:0003993
Gso3g1631 491 SUPERFAMILY Purple acid phosphatase, N-terminal domain 91 189 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1631 Gso-Chr3 42297408 42301434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1631 100 488 Miscellaneous Gene Families AT2G03450 26.383 2.16e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1631 K22390 - gmx:100819446 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1631 3 42297408 42301434 Gso3g1631 3 42297408 42301434 ECH
Gso19g1608 19 45041913 45045538 Gso3g1631 3 42297408 42301434 GST