Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1608 ATGTATTCCATCTCATTCTGTGTACCTTCCACAACCCCACTATATAACAGACCCTCCATATTCAAAATGGTGCCTTTCACTCCCAGCAACAAATTGCAACAATCAACAAGTAGTCCAACCCGAATAAACATGATGGGAAAATGTAGTAAGTCCCTTATGGCGTTCCCAATCCTCCTCCTACGCACCCTATGCTTCCTTTTGTTCTCACAACCCCTCCTTTCTCAGGAGAACAATTTTGTTCGTCAGCCAGCTGCTCAACTCATCATCACTCCCCACCATCGCTCCCATTCAGACCCCCAACAGGTACACATTTCTTTGGTGGGCCAAGAGAAGATGAGGGTGTCGTGGATAACCGAAGACAAGCACGCAGAATCTGTGGTGGAGTACGGAACAAAGGCAGGGGAATATAGCGCAAAAGCAACGGGGGTGTACACCTCGTACCAATATTTTTTCTATAACTCCGGCAAGATTCACAACGTTGTAATTGGGCCATTGCAGCCTGGTTCGACTTACTTCTACAGGTGCGGAGGGTCAGGTCCTGAGTTTTCCTTCAAGACACCACCACCCAGGTGTCCCATTGAATTTGTCATCGTTGGTGACTTGGGACAAACAGAATGGACTGCATCAACCTTAAAACACATTGATAGCAGCGACTATGATGTGTTCTTGTTACCAGGAGACCTATCCTATGCCGATTCCCAACAACCTTTGTGGGACTCTTTTGGTCGTTTGGTGGAGCCATATGCTAGTAAAAGGCCATGGATGGTTACCGAAGGCAACCACGAGATTGAGATTTTCCCTATTATCTACCCACAAGGCTTCCAAGCCTACAACGCTCGCTGGCCCATGCCCTTCCAACAAAGTGGTTCCACCTCAAACCTCTATTACTCCTTCGAGGTTGCCGGCACCCACGTCATCATGCTAGGTTCCTACACTGATTTTGACTCCCAATCACTTCAGTACACGTGGCTTCAATCTGACCTCGCCAACATTGATAGGGTCAAGACACCTTGGGTGATTGTGTTGCTGCATGCACCTTGGTATAATACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAGGAGTTGCTTTATGAGGCACGCGTTGACTTGGTTTTTGCTGGCCATGTTCATGCATATGAACGCTTCACTCGAATTTACGACAATAAGGCTGATTCGTGTGGACCAATGTACGTGACAATTGGTGACGGAGGAAACAGGGAAGGTCTTGCGTTAATGTTTAAGAACCCTTCAAGCCCGCTCTCATTGTATCGAGAGCCAAGCTTTGGACATGGAAGGTTGCGAATACTAAATGAAACACATGCACATTGGTCATGGCACCGAAACAATGATGCTGATGCGGTTGTAGCTGATGGTGTTTGGATAGAGAGTTTAAGCAGCTCGAAAGCATGCTCGAAGACACCATACCAACAATATGCTGCTAACGAAGAGCTATAA 1473 0.4705 MYSISFCVPSTTPLYNRPSIFKMVPFTPSNKLQQSTSSPTRINMMGKCSKSLMAFPILLLRTLCFLLFSQPLLSQENNFVRQPAAQLIITPHHRSHSDPQQVHISLVGQEKMRVSWITEDKHAESVVEYGTKAGEYSAKATGVYTSYQYFFYNSGKIHNVVIGPLQPGSTYFYRCGGSGPEFSFKTPPPRCPIEFVIVGDLGQTEWTASTLKHIDSSDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQGFQAYNARWPMPFQQSGSTSNLYYSFEVAGTHVIMLGSYTDFDSQSLQYTWLQSDLANIDRVKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYEARVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGNREGLALMFKNPSSPLSLYREPSFGHGRLRILNETHAHWSWHRNNDADAVVADGVWIESLSSSKACSKTPYQQYAANEEL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1608 490 SUPERFAMILY Metallo-dependent phosphatases 192 456 IPR029052 -
Gso19g1608 490 CDD MPP_PAPs 192 469 IPR041792 -
Gso19g1608 490 Pfam Calcineurin-like phosphoesterase 195 385 IPR004843 GO:0016787
Gso19g1608 490 Pfam Iron/zinc purple acid phosphatase-like protein C 400 457 IPR025733 -
Gso19g1608 490 Gene3D - 98 189 - -
Gso19g1608 490 Gene3D - 190 477 IPR029052 -
Gso19g1608 490 PANTHER PURPLE ACID PHOSPHATASE 32 481 - -
Gso19g1608 490 PANTHER ACID PHOSPHATASE RELATED 32 481 IPR039331 GO:0003993
Gso19g1608 490 SUPERFAMILY Purple acid phosphatase, N-terminal domain 89 188 IPR008963 GO:0003993|GO:0046872
Gso19g1608 490 Pfam Purple acid Phosphatase, N-terminal domain 99 186 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1608 Gso-Chr19 45041913 45045538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1608 99 459 Miscellaneous Gene Families AT2G03450 27.397 1.82e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1608 K22390 - gmx:100817498 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1608 19 45041913 45045538 Gso3g1631 3 42297408 42301434 GST