Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1619 ATGGCATCCACATCAGTGAGAAATGATTTGGTCAGCGGAAAAAGAAACCAGCGGAGCTGGCCCTCATCGAGTTTCAGAGCAGCAAGTTGGAGTGCATCTCCATTCACAAAGAGTGCTGGACGCAGCAGTGGAGAGGATAATGAGGAGGATCTCAAATGGGCTGCCATCGAGCGTTTGCCAACGCTAGATCGCATGAGAAAAGGGATGATGAGTGTAGTGCTTGACAACGGAAAGGTTGTGTGTTGCCAAGTTGATGTCACTCATCTTAAGTTGCAAGACAAGAAGCAACTATTGGATACTGTACTCAAATATGTTGACGATGATAATGATAAGTTTCTTCGTAAACTTAGAGACAGAACTAATAGGGTGGGGATTAAAATTCCAAATATTGAAGTCAGATACGAGAATTTATCGGTGGAGGGAAATGTGCATGTTGGAACTAGAGCACTTCCTACCCTGCTTAATGTTACTCTCAACACCTTTGAGAGGATTCTGGAGTTGTTTCGCCTTGCACCTTCCAAGAAGAGGAAAATTCATATTCTTAAAGATGTTAGTGGAATCGTCAAACCATCAAGGATGACCCTACTTCTAGGTCCTCCAGGTGCAGGGAAAACAACATTACTTTTAGCACTTGCAGGGAAGCTTGACCCAGATTTAAAGGTTTCAGGGAGAATAACTTATTGTGGCCATGAACTGAAAGAATTTGTTGCTAAAAAAACTTGTGCCTATATTGGTCAACATGACCTTCACTATGGAGAAATGACAGTGAGAGAGACATTAGATTTTTCAGGACGTTGTCTAGGTGTTGGCACAAGGTATCAAATGTTGGAAGAACTTTTACGAAGGGAGAAACAAGCAGGAATTAAACCGGATCCTGAGATTGATGCATTTATGAAGGCTACAGCCATATATGGTCAAAAAACTAATTTGCAAACAGATTATGTTCTTAAGATAATTGGATTGGATATTTGCGCTGACACTTTGGTTGGTGATAACATGAGAAGGGGTATCTCCGGTGGACAAAGGAAGCGTGTCACAACAGGGGAGATGCTAGTAGGACCGGCAAAGGCACTATTTATGGACGAAATATCAACAGGATTGGACAGTTCCACCACTTTTCAGATATGCAAGTTCATGAGGCAAATGGTTCATATAATGGATGAAACCATGGTGATTTCTCTTCTACAACCAGCACCGGAGACATATGAACTATTTGATGATGTTATCCTTCTTTCAGAAGGTCAAATTGTATACCAAGGTCCACGAGAACATGTGCTAGAGTTCTTTGAAAACATGGGTTTCAAATGTCCTCCAAGAAAGGGAGTTGCTGACTTTTTACAAGAAGTAACATCTAAGAAAGATCAAGAACAATATTGGTTTAGAAGAGATGAACCTTATAGATACATTTCAGTTCCTGAATTTGCAGAGTGCTTCCAATCGTTTTACATAGGAGAACAACTTGCAACAGAGTTTAAGGTTCCTTATGATAAGAGTCAAACTCATCGTGCTGCCTTAGCTAAAGACAAGTACGGTATATCAAATTGGGAACTACTGAAGGCATGTTTCTCAAGAGAATGGTTGCTTATGAGACGCGAAATGTTTGTCTACATATACAGGATAATACAGTTAGTTGTCTTATCTATTTTAGGCTTTACTTTGTTCCTTAGAACTGAAATGTCAGTGGGCACTGTTGAAGATGGGATGAAGTTCTTTGGAGCAATGTTTTTCTCTATAATGAACATAATGTTCAATGGGTTTTCAGAACAAGCCATGCTTGTTTCAAGGCTTCCTGTCTTTTACAAACAAAGGGATTTCATGTTCTACCCTGCATGGGCATTTGGGTTACCTATATGGGTTCTCAGGATCCCCATTTCCTTGGTGGAATCAGGAATATGGGTTGTTTTCACATACTACACAATTGGATTTGCTCCTTCAGCTAGCAGGTTTTTCAAACAATTCTTGGCACTGTTTGGCGTTCATCAGATGGCTATCTCTCTATTTCGGCTCGTTGGTGCAGTTGGTAGAACATATGTTGTTGCTAATATCCTGAGTGGCTTGACTTTTCAAATAGTATTGGTGCTTGGAGGATTTATTGTCTCCAAAAATAATATCAAGCCATGGTTGAAATGGGGCTATTATGTTTCTCCTATGATGTATGGTCAGAATGCCATAGTAATAAATGAATTTTTAGACGAAAGATGGAGTAAACCAAATACAGACTCTAGATTTGATGCACCTACAGTTGGAAAAGTACTTCTGAAGTCTAGAGGCTTTTTCACTGATGATTATTGGTTTTGGATATGTATTGGAGCCTTGTTTGGTTTTGTTCTTCTTTTCAATCTTCTGTGCATTGTTGCATTGACTTATTTGAATGCTATGGGTGATTCAAAAGCATTCATCACAGACGAAGACGACAAGAAGAATGAAAATTCAACCTTTAGACAACATGTCAATAGAGGAGGTCAAGGTATAAACATGGCAGTGAGAAATGCTTCACATCAAGAACGAAGAACAGGAATGGTCCTGCCGTTTCAACCTCTTTCACTCGCATTCAATGACGTGAACTACTATGTAGACATGCCTGCTGAAATGAAAAGTCAAGGAATCAATGAAGATAGACTTCAACTACTACATGATGCTAGTGGTGCTTTTAGACCAGGTATTTTGACAGCACTTATGGGTGTTAGTGGTGCTGGGAAGACTACCCTTATGGATGTATTAGCTGGAAGAAAAACAGGTGGATACATTGAAGGAAGTATTAGCATCTCAGGTTATCCAAAGAACCAAGCAACATTTGCTCGTGTCAGCGGTTATTGTGAACAAAATGACATTCATTCTCCATATGTTACTGTGTATGAGTCACTATTGTTTTCAGCATGGCTTCGCCTTCCTTCAGATGTAAATGCACAAAATCGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTTGAGCTTAACCAAATCAGAAATGCACTTGTGGGCCTTCCAGGAGTGGATGGTCTATCCACGGAACAGAGGAAAAGGGTTACTATTGCTGTAGAATTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCTGCTGCTATTGTTATGCGTACTGTAAGAAACACAGTGGACACTGGGAGAACCGTTGTTTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGTTACTTTTGATGAAAAGAGGAGGACAAGTTATCTATGCTGGACCTCTTGGTCACCATTCACAAAAGCTCATAGAATATTTTGAATCCATTGCAGGGGTTCAAAAAATCAAGGATGGTTATAATCCTGCCACATGGATGCTCGAGGTTAGCACTCCTTCAATTGAGGCTCATCTTGGCATAGATTTTGCGGAGATTTACACTAACTCTACTCTTTACCAAAGGAATCAAGAGCTTATCAAAGAGCTCAGTACTCCACCACAGGGTTCCAGTGACTTGCGCTTCCCAACCAAATATTCCCAATCATTCTTTGTTCAGTGCAAAGCTTGCTTCTGGAAACAATATTGGTCGTATTGGAGAAACCCTTCGTACAATGCAGTTCGATTGTTCTTCACAATAGCCATTGGGATAATGTTTGGTCTAATCTTCTGGAATAAAGCCAAAAATATCAAAAAGCAACAAGATTTGTTTGATCTTTTAGGAGCCATGTACGCTGCAGTGATGTTCCTTGGAACCTCGAACACTATGGGAGTGCAACCAATTGTTGACATAGAAAGAACTGTATTGTATCGTGAAAGAGCTGCAGGGATGTATTCAACATTGACTTATGCAATTAGTCAGGTGGCAATAGAGGCAATTTATTCTGCCACTCAAACGACCATCTTCAGTGTCATCATCTACTCCATGATGGGGTTTGAATGGACGGCCAGGAAATTTCTTTCCTTCTACTACTTCATGCTTATGTGTTTGATCTACTACACATTATATGGGATGATGATTGTTGCCGTCACCCCAAGTTTTCAAATTGCTGCTGTTTGCAATTCCTTCTTCTTGACCATCTGGAACACGTTCTGTGGCTTTGTCATTCCTAGGACGCAAATTCCTATATGGTGGAGATGGTACTATTGGCTAGCTCCTAATGCTTGGACACTGTATGGCCTTGTTACCTCTCAATTCGGTGATAAAATTACACAAGTGGAAATTCCAGGAGCTGAAAACATGGGGCTGAAGGAACTACTTAAGAAAAACTTCGGTTATGACTATCACTTCCTCCCAGTGGTTGTTGTTGTTCACTTAGGCTGGGTTCTCCTTTTCTTGTTTGTTTTTGCCTATAGCATAAAATTCCTGAACTTCCAAAAGAGATGA 4353 0.4025 MASTSVRNDLVSGKRNQRSWPSSSFRAASWSASPFTKSAGRSSGEDNEEDLKWAAIERLPTLDRMRKGMMSVVLDNGKVVCCQVDVTHLKLQDKKQLLDTVLKYVDDDNDKFLRKLRDRTNRVGIKIPNIEVRYENLSVEGNVHVGTRALPTLLNVTLNTFERILELFRLAPSKKRKIHILKDVSGIVKPSRMTLLLGPPGAGKTTLLLALAGKLDPDLKVSGRITYCGHELKEFVAKKTCAYIGQHDLHYGEMTVRETLDFSGRCLGVGTRYQMLEELLRREKQAGIKPDPEIDAFMKATAIYGQKTNLQTDYVLKIIGLDICADTLVGDNMRRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDETMVISLLQPAPETYELFDDVILLSEGQIVYQGPREHVLEFFENMGFKCPPRKGVADFLQEVTSKKDQEQYWFRRDEPYRYISVPEFAECFQSFYIGEQLATEFKVPYDKSQTHRAALAKDKYGISNWELLKACFSREWLLMRREMFVYIYRIIQLVVLSILGFTLFLRTEMSVGTVEDGMKFFGAMFFSIMNIMFNGFSEQAMLVSRLPVFYKQRDFMFYPAWAFGLPIWVLRIPISLVESGIWVVFTYYTIGFAPSASRFFKQFLALFGVHQMAISLFRLVGAVGRTYVVANILSGLTFQIVLVLGGFIVSKNNIKPWLKWGYYVSPMMYGQNAIVINEFLDERWSKPNTDSRFDAPTVGKVLLKSRGFFTDDYWFWICIGALFGFVLLFNLLCIVALTYLNAMGDSKAFITDEDDKKNENSTFRQHVNRGGQGINMAVRNASHQERRTGMVLPFQPLSLAFNDVNYYVDMPAEMKSQGINEDRLQLLHDASGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARVSGYCEQNDIHSPYVTVYESLLFSAWLRLPSDVNAQNRKMFVEEVMELVELNQIRNALVGLPGVDGLSTEQRKRVTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGHHSQKLIEYFESIAGVQKIKDGYNPATWMLEVSTPSIEAHLGIDFAEIYTNSTLYQRNQELIKELSTPPQGSSDLRFPTKYSQSFFVQCKACFWKQYWSYWRNPSYNAVRLFFTIAIGIMFGLIFWNKAKNIKKQQDLFDLLGAMYAAVMFLGTSNTMGVQPIVDIERTVLYRERAAGMYSTLTYAISQVAIEAIYSATQTTIFSVIIYSMMGFEWTARKFLSFYYFMLMCLIYYTLYGMMIVAVTPSFQIAAVCNSFFLTIWNTFCGFVIPRTQIPIWWRWYYWLAPNAWTLYGLVTSQFGDKITQVEIPGAENMGLKELLKKNFGYDYHFLPVVVVVHLGWVLLFLFVFAYSIKFLNFQKR* 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1619 1450 Gene3D - 863 1100 IPR027417 -
Gso3g1619 1450 Gene3D - 167 468 IPR027417 -
Gso3g1619 1450 MobiDBLite consensus disorder prediction 1 47 - -
Gso3g1619 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1101 IPR003439 GO:0005524
Gso3g1619 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 872 1087 IPR027417 -
Gso3g1619 1450 SMART AAA_5 886 1078 IPR003593 -
Gso3g1619 1450 SMART AAA_5 190 415 IPR003593 -
Gso3g1619 1450 Pfam ABC-2 type transporter 1175 1388 IPR013525 GO:0016020|GO:0140359
Gso3g1619 1450 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Gso3g1619 1450 Pfam Plant PDR ABC transporter associated 734 800 IPR013581 -
Gso3g1619 1450 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
Gso3g1619 1450 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Gso3g1619 1450 CDD ABCG_PDR_domain1 169 420 IPR034001 -
Gso3g1619 1450 MobiDBLite consensus disorder prediction 1 41 - -
Gso3g1619 1450 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Gso3g1619 1450 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 38 1450 - -
Gso3g1619 1450 Pfam ABC-transporter N-terminal 107 156 IPR029481 -
Gso3g1619 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 437 IPR027417 -
Gso3g1619 1450 Pfam ABC-2 type transporter 1058 1119 IPR043926 GO:0140359
Gso3g1619 1450 Pfam ABC-2 type transporter 396 447 IPR043926 GO:0140359
Gso3g1619 1450 PANTHER ATP-BINDING CASSETTE TRANSPORTER 38 1450 - -
Gso3g1619 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 438 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1619 Gso-Chr3 42161003 42170490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1619 K08711 - gmx:100790545 2862.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1599 19 44966467 44975129 Gso3g1619 3 42161003 42170490 GST