Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1599 ATGGCATCGGCACTGGCGGGGGATGATTTGGCCGTATCAACTAGCAGTCGCCGGAGCTGGACAACGGCGAGTTTCAGGGATGCATGGACGGCAGCGCCGGACGTGTTCAACGTGAGCGGCCGCCACGTGTATGAGGACGACGAGGAAGAGCTCAAATGGGCTGCCATAGACCGCTTGCCAACTTTTGAACGCATGAGAAAAGGCGTCCTCAAGCACGTGCTCGACGATGGACATGTGATGCTCGATGAAGTCGATGTTTCCAACCTTTGCTTACATGACAAGAAGCTCTTAATTGACAGCATACTTAAGATTGTCGAGGAAGACAATGAAAAATTCCTACGCAGACTTAGAAATAGAGTTGATAGAGTAGGGATTGAAATTCCGAAGATTGAAGTTCGGTGCGAGAATTTATCTGTGGAGGGTGATGTGCATGTTGGGAGTAGAGCACTTCCTACCCTGCTTAATGCTACTCTCAATGCTTTTGAGAGTGTTCTGGGAATGTTTCACCTTGCACCATCCAAGAAGAGGGAAATCCAGATTCTTAAAGATGTTAGTGGAATCGTTAAACCCTCAAGGATGACTCTCCTTTTGGGTCCTCCATCTTCGGGGAAAACAACATTGCTTTTGGCGCTTGCAGGGAAACTTGATCGTGATTTAAGGGTGTCTGGGAGGATCACTTACTGTGGCCATGAGCTAAATGAATTTGTTCCACAAAAAACCTGTGCCTATATCAGTCAACACGACATTCACTATGGAGAAATGACAGTGAGAGAGACATTAGATTTTTCAGGACGTTGTCTAGGTGTTGGTACTAGGTATGAAGCATTAGTGGAACTGTCAAGAAGGGAGAGAGAAGCAGGAATAAAGCCAGACCCTGAGATTGATGCATTCATGAAGGCTATAGCCTTGTCAGGTCAAAAAACCAATTTGGTAACAGATTATGTACTCAAGATCCTTGGATTGGATATTTGTGCCGACATTGTGGTTGGAGATGAGATGAGAAGAGGCATCTCTGGTGGACAGAAGAAGCGAGTAACAACAGGGGAGATGCTGGTAGGACCGGCAAAGGCACTATTTATGGATGAAATATCAACAGGATTAGACAGTTCCACCACCTTTCAGATATGCAAGTTCATGAGGCAAATGGTTCATGTAATGGACGTAACCATGGTGATTTCGCTTCTACAACCCGCACCAGAGACATTTGAACTCTTTGATGACATTATCCTACTTTCAGAAGGTCAAATTGTATATCAAGGTCCACGTGAGAATGGGTTAGAGTTCTTTGAACACATGGGTTTCAAGTGTCCTGAGAGAAAAGGAGTTACTGATTTTTTACAAGAAGTAACATCCAAGAAAGACCAGCAACAATATTGGTCTAGAAAAGATGAACCTTACAGATATGTTTCCGTTTCAGAATTTGTGCAAGCCTTTAGTTCATTTGACATAGGAGAGCAACTTGCCACTGAGCTTGGAGTTCCCTATGATAAGAGACAAGCCCACCCAGCTGCCTTAGTGAAAGACAAGTATGGTATAACAAACTGGGAACTATTTAAGGCATGTTTTTCAAGGGAATGGCTACTCATGAAGCGCAGTTCTTTTGTTTATATATTCAAGACAACACAGATAACAATCATGTCTATTATTACATTTACTGTGTTCCTTAGAACAGAAATGTCAGTGGGAACTGTTGAAGATGGACAAAAATTCTTTGGAGCATTATTCTTTTCGCTAATAAACGTGATGTTTAATGGGATGGCAGAACTATCTATGACTGTTTTTAGGCTTCCTGTCTTTTACAAACAAAGGGATTTCAGGTTCTACCCTGCATGGGCATTTGGTTTGCCTATATGGCTTCTCAGGATCCCTCTGTCCATTATGGAATCAGGGATATGGATTGCCCTTACATATTACACCATAGGGTTTGCTCCTTCTGCTAGCAGATTTATCCGGCAATTCTTGGCATTATTTGCCATTCATCAGATGGCTCTCTCTTTATTTCGGTTCCTTGCTGCAGCTGGTAGAACACTAGTTGTTGCTAATACACTGGGTACCTTGTCCCTGCAATTGGTATTTGTGCTAGGAGGTTTTGTTATTGCCAAAGATGACATTGAGCCATGGATGATGTGGGGCTATTATCTATCTCCTATGATGTATGGTCAGAATGCCATAGTAATGAATGAATTCTTAGATAAAAGATGGAGTAAACCAAATACAGACCCTAGAATTAATGCACCTACAGTTGGAAAGGTGCTTCTCAAATCTAGAGGCTTCTATACAGAAGAGTATTGGTTTTGGATCTGCATTGGAGCCTTGCTTGGGTTTTCTCTTCTCTTCAATCTCTTATTCATTGTTGCTTTAACTTATTTGAATCCTTTGGGTTATTCAAAAGCAGTCATTGCCGATGAAGGTGACAAAAAGAATAACAAGTCATCCTCTAGCCAACATATTCTTGAAGGAACAGACATGGCAGTGAAAGAATCTTCAGAAATGGCTAGTTCTTTGAACCAAGAACCAAGAAGGGGAATGGTTCTACCATTTCAACCTCTTTCACTTGCATTCAATCATATTAGCTACTATGTAGATATGCCTGCAGAAATGAGGAGTCGAGGAATCAATAAAGATCGACTTCAACTACTACAAGATGTTAGTGGTGCTTTTAGACCAGGAATTTTGACAGCACTTGTGGGTGTTAGTGGTGCTGGAAAGACAACCCTTATGGATGTATTAGCTGGAAGAAAAACAGGAGGATACATTGAAGGAAGTATTAGCATCTCAGGTTACCCAAAGAACCAAGCAACATTTGCTCGTATCAGCGGTTATTGTGAACAAAATGACATCCATTCTCCACATGTTACTGTATATGAATCACTATTATTTTCAGCATGGCTTCGCCTTCCTTCAGATGTAAATGCACAAAAGCGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTTGAGCTTAACCAAATCAGAGATGCACTAGTGGGTCTTCCAGGAGTGGATGGTCTATCAACAGAACAAAGGAAAAGGCTTACTATTGCGGTAGAATTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCTGCTGCTATTGTCATGCGAACTGTGAGAAATACAGTAGACACAGGGAGAACCGTTGTGTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGATTTTGTTGATGAAAAGAGGAGGACAAGTTATCTATGCTGGACCTCTTGGTCGTCACTCACACAAGCTAATAGAATATTTTGAAGGTATCCCAGGGGTTCCAAAAATCAAGGATGGTTATAATCCTGCCTCATGGATGCTTGATATCAGCTCTACAACAATGGAGGCTAATCTTGAGGTAGATTTTGCAGAGATTTATGCTAAGTCTACCCTCTACCGGAGGAATCAAGAACTTATTGAGGAGCTCAGTACCCCAGTACCAGATTCCAAGGACTTGCACTTCCCAACCAAATATTCCCAATCGTTTTTTGTTCAGTGCAAAGCTAATTTCTGGAAACAATATTGGTCCTACTGGAGATATCCTCAGTATAATGCTGTCCGATTCTTTATGACAATTGTTGTGGGAGTAATGTTTGGTGTGATTTTCTGGAATAAAGCCAAAAAGACCCATAAACAACAAGATTTGATGAATCTTTTGGGAGGCATGTATGCTGCTATGCTTTTTCTTGGAGCCATGAATGCTTCATCAGTGCAACCAGTTGTTGCCATTGAAAGAACTATCTTCTATCGTGAAAGAGCAGCAGGGATGTACTCTGCATTGCCCTATGCATTTGGCCAGGTGGCAATAGAGGCAATTTATAATGCAATTCAAACAGCAGTTTACTCTCTTATCCTTTACTCAATGATTGGGTTTGATTGGAAGGCAACAAGCTTCTTTTGGTTCTACTACTATATATTAATGTGCTTTATGTACTTCACGTTGTATGGAATGATGATTGTAGCACTAACACCGGGTCACCAGGTTGCTGCAATTTGTATGTCCTTCTTCTTGAGTTTCTGGAACTTGTTCTCTGGCTTTATCATTCCTAGGACGCAAATTCCTGTGTGGTGGAGATGGTATTATTGGGCTTCTCCTGTTTCTTGGACACTATATGGCCTTATTACCTCACAACTGGGTGACAAAAATGCAGAATTGGAGATACCAGGTGCTGGAAGCATGGGATTGAAGGAATTCCTTAAACAAAACTTGGGTTTTGACTATGATTTCCTTCCCGTTGTTGCTGCTGCTCATGTAGGCTGGGTTATCCTCTTCATGTTCGTTTTTGCCTATGGCATCAAATTCTTGAATTTCCAAAGGAGATAG 4362 0.4163 MASALAGDDLAVSTSSRRSWTTASFRDAWTAAPDVFNVSGRHVYEDDEEELKWAAIDRLPTFERMRKGVLKHVLDDGHVMLDEVDVSNLCLHDKKLLIDSILKIVEEDNEKFLRRLRNRVDRVGIEIPKIEVRCENLSVEGDVHVGSRALPTLLNATLNAFESVLGMFHLAPSKKREIQILKDVSGIVKPSRMTLLLGPPSSGKTTLLLALAGKLDRDLRVSGRITYCGHELNEFVPQKTCAYISQHDIHYGEMTVRETLDFSGRCLGVGTRYEALVELSRREREAGIKPDPEIDAFMKAIALSGQKTNLVTDYVLKILGLDICADIVVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHVMDVTMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENGLEFFEHMGFKCPERKGVTDFLQEVTSKKDQQQYWSRKDEPYRYVSVSEFVQAFSSFDIGEQLATELGVPYDKRQAHPAALVKDKYGITNWELFKACFSREWLLMKRSSFVYIFKTTQITIMSIITFTVFLRTEMSVGTVEDGQKFFGALFFSLINVMFNGMAELSMTVFRLPVFYKQRDFRFYPAWAFGLPIWLLRIPLSIMESGIWIALTYYTIGFAPSASRFIRQFLALFAIHQMALSLFRFLAAAGRTLVVANTLGTLSLQLVFVLGGFVIAKDDIEPWMMWGYYLSPMMYGQNAIVMNEFLDKRWSKPNTDPRINAPTVGKVLLKSRGFYTEEYWFWICIGALLGFSLLFNLLFIVALTYLNPLGYSKAVIADEGDKKNNKSSSSQHILEGTDMAVKESSEMASSLNQEPRRGMVLPFQPLSLAFNHISYYVDMPAEMRSRGINKDRLQLLQDVSGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSDVNAQKRKMFVEEVMELVELNQIRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEILLMKRGGQVIYAGPLGRHSHKLIEYFEGIPGVPKIKDGYNPASWMLDISSTTMEANLEVDFAEIYAKSTLYRRNQELIEELSTPVPDSKDLHFPTKYSQSFFVQCKANFWKQYWSYWRYPQYNAVRFFMTIVVGVMFGVIFWNKAKKTHKQQDLMNLLGGMYAAMLFLGAMNASSVQPVVAIERTIFYRERAAGMYSALPYAFGQVAIEAIYNAIQTAVYSLILYSMIGFDWKATSFFWFYYYILMCFMYFTLYGMMIVALTPGHQVAAICMSFFLSFWNLFSGFIIPRTQIPVWWRWYYWASPVSWTLYGLITSQLGDKNAELEIPGAGSMGLKEFLKQNLGFDYDFLPVVAAAHVGWVILFMFVFAYGIKFLNFQRR* 1454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1599 1453 SMART AAA_5 889 1081 IPR003593 -
Gso19g1599 1453 SMART AAA_5 190 415 IPR003593 -
Gso19g1599 1453 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 1453 - -
Gso19g1599 1453 CDD ABCG_PDR_domain2 849 1087 IPR034003 -
Gso19g1599 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 852 1104 IPR003439 GO:0005524
Gso19g1599 1453 CDD ABCG_PDR_domain1 170 420 IPR034001 -
Gso19g1599 1453 Pfam ABC-2 type transporter 1061 1131 IPR043926 GO:0140359
Gso19g1599 1453 Pfam ABC-2 type transporter 396 468 IPR043926 GO:0140359
Gso19g1599 1453 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Gso19g1599 1453 Pfam ABC-2 type transporter 1178 1390 IPR013525 GO:0016020|GO:0140359
Gso19g1599 1453 Pfam ABC transporter 880 1032 IPR003439 GO:0005524
Gso19g1599 1453 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Gso19g1599 1453 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 20 1453 - -
Gso19g1599 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Gso19g1599 1453 Pfam ABC-transporter N-terminal 106 156 IPR029481 -
Gso19g1599 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 875 1089 IPR027417 -
Gso19g1599 1453 Gene3D - 167 472 IPR027417 -
Gso19g1599 1453 Gene3D - 866 1098 IPR027417 -
Gso19g1599 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 438 IPR027417 -
Gso19g1599 1453 Pfam Plant PDR ABC transporter associated 734 800 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1599 Gso-Chr19 44966467 44975129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1599 K08711 - gmx:100786482 2871.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1599 19 44966467 44975129 Gso3g1619 3 42161003 42170490 GST