Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1616 ATGCAGAGTGAGAACCAGAACAACCAGTTGGTGGTGCAGAATTCGGGGAGCCTGAGCTTCAGCAGCCATTTGTCGAAGGAAGACGAAGAGATGTCAAGGTCTGCTCTCTCCACCTTCAGAGCCAAGGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAGCTTCAGTTAGGTCGAGTCGAAGAAGAAACTAAGCGTCTTGCAACCATTCGTGAGGAGCTTGAAGCCCTGGCAGATCCAATGAGGAAAGAAGTTGCACTTGTTCGAAAAAGAATTGATTCCGTAAACAAAGAATTAAAGCCACTGGGTCATACCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCCCTTGAAGCTTTCAATGAAAAGAACAGGGAAAAAGTACAGCTAATCACCAAGTTAATGGAGTTGGTGGGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATTCGATGCAATGA 495 0.4505 MQSENQNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVALVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNEKNREKVQLITKLMELVGESERLRMKKLEELSKNIDSMQ* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1616 164 MobiDBLite consensus disorder prediction 23 41 - -
Gso3g1616 164 Pfam Transcriptional activator 13 162 IPR007033 -
Gso3g1616 164 MobiDBLite consensus disorder prediction 1 41 - -
Gso3g1616 164 PANTHER EXPRESSED PROTEIN 6 162 - -
Gso3g1616 164 Coils Coil 110 130 - -
Gso3g1616 164 PANTHER RAB6-INTERACTING PROTEIN GORAB 6 162 IPR007033 -
Gso3g1616 164 MobiDBLite consensus disorder prediction 1 22 - -
Gso3g1616 164 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1616 Gso-Chr3 42109707 42111774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1616 - - gmx:100499923 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1616 3 42109707 42111774 Gso3g1616 3 42109707 42111774 ECH
Gso3g1616 3 42109707 42111774 Gso11g1414 11 16275675 16278110 ECH
Gso19g1596 19 44910711 44912602 Gso3g1616 3 42109707 42111774 GST