Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1414 ATGGCAACACCAAAACAGTCATATGAGCAGCAACAACAACAACAACCAAATGTGCAGCGAGTGAGGAACTCGGGGATGATTAACAGCAACCAGAGTCCAATGAGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCTTTGGCAATGTTCCGAGCAAAGGAAGAAGAAATTGAAAGGAGAAAAATGGAGGTGAGGGATAAGGTTCACGCTTATCTCGGTCGAGTAGAGGAGGAAACAAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAGGGTCTCACAGATCCATTGAGGAAGGAAGTTGCAATAGTTCGAAAGAAGATAGACAGTGTTAACAAAGAGTTAAAGCCACTGGGCCAAACCTGCCAGAGAAAGGAGAGAGAATACAAGGAAGCCCTTGAAGTTTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACCAAACTAATGGAGCTGGTGACTGAAAGCGAGAAGTTGAGGATGAAGAAGCTGGAGGAGTTAAGCAAAAACTTAGATACCCTGCATTGA 528 0.4394 MATPKQSYEQQQQQQPNVQRVRNSGMINSNQSPMRDDKEEEMSRSALAMFRAKEEEIERRKMEVRDKVHAYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKELKPLGQTCQRKEREYKEALEVFNEKNKEKAQLVTKLMELVTESEKLRMKKLEELSKNLDTLH* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1414 175 Pfam Transcriptional activator 22 173 IPR007033 -
Gso11g1414 175 PANTHER - 9 174 - -
Gso11g1414 175 PANTHER RAB6-INTERACTING PROTEIN GORAB 9 174 IPR007033 -
Gso11g1414 175 Coils Coil 68 88 - -
Gso11g1414 175 MobiDBLite consensus disorder prediction 1 32 - -
Gso11g1414 175 Coils Coil 121 141 - -
Gso11g1414 175 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1414 Gso-Chr11 16275675 16278110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1414 - - gmx:100796368 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1414 11 16275675 16278110 Gso11g1414 11 16275675 16278110 ECH
Gso3g1616 3 42109707 42111774 Gso11g1414 11 16275675 16278110 ECH
Gso12g0702 12 7025767 7028418 Gso11g1414 11 16275675 16278110 GST