Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1609 ATGCGAAGAACTGTGATGCTCAACATGTTGCAAACTCGTCACCCCCAATTTCTAGCGATTATTCCCTTTCTCTTTTTATATACTTTGACATGCTCCGAAACCGCAACAACCACTTCCATCCCACAAGAGCTTCACATAGGCTTCTCGGCGACGGCAGAGTCTTCAACGACGCCGTTTCAGGCAGTTCTGAGCGACCATAGTGGCAACTTCTCTCTAGGCTTCCTCCGCGTGAACCAAAACCAGCTGGCACTGGCGGTCCTCCACGTGGCATCCTCGGAGCCATTCTGGGTGGCCAACCCAACCCACGCAGCATCCTGGTCCGACACCACGCGCCTCTTCTTCAACGGCAGTCTTGTTTTGTCAGACCCCGAAACGCGCGTTTCGTGGTCAACCGCCACAAACAACGGCGACCGCGTTGTGCTCCTCAACACCTCCAATTTACAAGTTCACGACAAAGGCGGCACTCCCTTGTGGCAGAGTTTTCACTTTCCCGCAAATACCCTCGTCCAGGACCAGAATTTCACCTCCAACATGACTCTTTTGTCCTCCAACGGCATTTATTCTATGCGGTTAGGCAACGATTTCATGGGCCTATACGAAAACCACGACTCGTTATATTGGAAACGCACGCCACTGGGAGCAAAAGCGGAAGTAAAGGAAGGGCAGGGACCGATTTACGCCCGAGTCAACCCGGAGGGTTACCTCGGGATGTATCAGACAAGCGACGAGAAGCCCGCGGATGTTCAAAAGTTCAACACGTTCCAACTAACGTCGTCGTTTTTGTTGCTGCGGTTGGAACCGGACGGGAATCTGAAGGGTTATTACTGGGACGGTTCCAGGTGGATGCTTAACTACCAGGCGATTACTGAAGCCTGCGAGCTCCCCCGCTCCTGCGGTTCGTACGGTTTGTGCACGCCGGGTGGGTCAGGATGCTCCTGTTTAGATAACCGAACCCGGTTCGAACCGGGTGGGTGTTTTAATGATGCTTCTTCTGGAGACGCAGACTTGTGTAGTAGTGAAGGAATTGGTGGAAAAAGTAGTTACTGGGTGCTAAGAAGAACCGGAGTGGAGGCAGCGCATAAGGAGCTACTAAGGCACGTAACGACGTCGTCTCTGGCGGAGTGTGAGGGATTGTGCCAGAACAACTGTAGCTGTTGGGGGGCGCTGTATAGCAACGAAACCGGGTTTTGTTATTTGTTGGAGTATACGATCCAGACCTTGCTGGGTACCGGGGATGGGTCAAAAGTGGGTTATTTCAAGGTTAAGAAAGAGGAACGAAGAACGAAACGGGTTTGGATACGGGTTGGGGTTGTGGTTACGGTTTTGGTTGGGGTTGGGGTTATTATTATTGGGGTCGGGTTTTGCGTGACGAGATGGAAAAAGAAGAGAGGGGTGAAGGAAGAGGATTGGGGTTCGCCCGGCCCGTATAAGAATCTCGAATCCGCAAGTTTTAGATCCATTGAAATGAGCAATAGTAACAGTGCCAACGAATGA 1494 0.5174 MRRTVMLNMLQTRHPQFLAIIPFLFLYTLTCSETATTTSIPQELHIGFSATAESSTTPFQAVLSDHSGNFSLGFLRVNQNQLALAVLHVASSEPFWVANPTHAASWSDTTRLFFNGSLVLSDPETRVSWSTATNNGDRVVLLNTSNLQVHDKGGTPLWQSFHFPANTLVQDQNFTSNMTLLSSNGIYSMRLGNDFMGLYENHDSLYWKRTPLGAKAEVKEGQGPIYARVNPEGYLGMYQTSDEKPADVQKFNTFQLTSSFLLLRLEPDGNLKGYYWDGSRWMLNYQAITEACELPRSCGSYGLCTPGGSGCSCLDNRTRFEPGGCFNDASSGDADLCSSEGIGGKSSYWVLRRTGVEAAHKELLRHVTTSSLAECEGLCQNNCSCWGALYSNETGFCYLLEYTIQTLLGTGDGSKVGYFKVKKEERRTKRVWIRVGVVVTVLVGVGVIIIGVGFCVTRWKKKRGVKEEDWGSPGPYKNLESASFRSIEMSNSNSANE* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1609 497 Pfam S-locus glycoprotein domain 253 315 IPR000858 GO:0048544
Gso3g1609 497 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 209 IPR036426 -
Gso3g1609 497 PIRSF SLG 9 435 IPR035446 -
Gso3g1609 497 PANTHER OS11G0149900 PROTEIN 44 482 - -
Gso3g1609 497 Pfam D-mannose binding lectin 95 180 IPR001480 -
Gso3g1609 497 SMART blect_4 43 164 IPR001480 -
Gso3g1609 497 ProSiteProfiles PAN/Apple domain profile. 337 423 IPR003609 -
Gso3g1609 497 Pfam PAN domain 366 407 IPR003609 -
Gso3g1609 497 PANTHER - 44 482 - -
Gso3g1609 497 Gene3D - 49 163 IPR036426 -
Gso3g1609 497 ProSiteProfiles Bulb-type lectin domain profile. 48 162 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1609 Gso-Chr3 42023096 42025310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1609 - - gmx:100814305 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1609 3 42023096 42025310 Gso3g1609 3 42023096 42025310 ECH
Gso19g1591 19 44826235 44828262 Gso3g1609 3 42023096 42025310 GST