Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1591 ATGTTCAACATGTTGCAAACTCATCACCTCCAGTTTCTAGCGATTCTCTTTCTATATACGCTGACATGCTCTGAAACCGCAGCCACTTCCATCCCACAAGAGCTTCACATAGGCTTCTCTGTGACGCCAGAGTCTTGGACGACGCCGTTTCAAGCAGTTCTGAGCGATCATAGTGGCAACTTCTCTCTAGGCTTCCTCCGCGTGAACCAAAACCAGCTGGCACTGGCGGTCCTCCACGTGGCATCCTCGGAGCCATTCTGGGTGGCCAACCCATCCCACGCGCCATCATGGTCCGACAACACGCGCCTCTTCTTCAACGGCAGCCTCGTCCTGTCCGACCCCGAAACGCTCGTTTTGTGGTCAACCGCCACAAACGGAGACCGCGTGGTGCTCCTCAACAGCTCCAATTTACAAGTTCACCACAATGGCATTCCCCTATGGGAGAGTTTTCACTTTCCCAAAAATACTCTCGTCCAGGACCAGAATTTCACCTCCAACATGACTCTTTTGTCCTCCAACGGCATTTATTCCATGAGGTTAGGCAACGATTTCATGGGGTTATACGAAAACCATGTCCAATTATATTGGAAACGCACGCCACTGGGAGCAAAAGCGGAAGTAAAGGAAGGGCAGGGACCGATTTACGCCCGAGTCAACCCGGAGGGTTACCTCGGGATGTATCAGACAACCGACGAGAAGCCCACGGATGTTCAAAAGTTCAACACGTTCCAACAAACGTCGTCGTTTTTGTTCGTGCGGTTGGAACCGGACGGGAATCTGAAGGGCTACTACTGGGACGGTTCCACGTGGCAGCTCAACTACCAGGCTATTACTGAAGCCTGCGACCTCCCCCGCTCCTGCGGTTCGTACGGTTTGTGCACTCCGGGAGGGTCTGGGTGCTCCTGTTTAGAAAACCGAACCCGGTTCGAACCGGATGGGTGTTTTAAAGATGTTGGTGGAGAGTCGTCTGGGGACTTGTGTAGTAGTGAAGGGATTGGTGGAAGTAAAAGCAGTTACTGGGTGCTGAGAAGAACGGGAGTGGAAGCACCGCATAAGGAGCTAGTAAGGCACCTAACGACGTCGTCTCGGGCGGATTGTGAGGGATTGTGCCAGAACAACTGTAGCTGCTGGGGGGCGCTGTATAGCAACGCAACCGGGTTTTGTTATATGTTGGACTATCCGATCCAGACAATGGTGGGTACTGGGGATGGGTCAAAAGTGGGTTACTTCAAGGTTAAAAAAGAGGAACGAGGAAAGAACCGGGTTTGGATACGGGTTGGGGTTGTGGTTACGGTTTTGGTTGGGGTTGGGGTTATTATTGTTGGAACCGGATTTTGCGTGACGAGATGGAGAAAGAGGAGAGGGGTGAAGGAAGAGGAATGGGGTTCGCCCGGCCCGTATAAGAATCTTGGATCCGCAAGTTTTAGATTCATAGAAATGAGCAATGCCCATGACGCAAGGGGTGACGCATGTGCTCAAAGTTGA 1485 0.5205 MFNMLQTHHLQFLAILFLYTLTCSETAATSIPQELHIGFSVTPESWTTPFQAVLSDHSGNFSLGFLRVNQNQLALAVLHVASSEPFWVANPSHAPSWSDNTRLFFNGSLVLSDPETLVLWSTATNGDRVVLLNSSNLQVHHNGIPLWESFHFPKNTLVQDQNFTSNMTLLSSNGIYSMRLGNDFMGLYENHVQLYWKRTPLGAKAEVKEGQGPIYARVNPEGYLGMYQTTDEKPTDVQKFNTFQQTSSFLFVRLEPDGNLKGYYWDGSTWQLNYQAITEACDLPRSCGSYGLCTPGGSGCSCLENRTRFEPDGCFKDVGGESSGDLCSSEGIGGSKSSYWVLRRTGVEAPHKELVRHLTTSSRADCEGLCQNNCSCWGALYSNATGFCYMLDYPIQTMVGTGDGSKVGYFKVKKEERGKNRVWIRVGVVVTVLVGVGVIIVGTGFCVTRWRKRRGVKEEEWGSPGPYKNLGSASFRFIEMSNAHDARGDACAQS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1591 494 ProSiteProfiles PAN/Apple domain profile. 327 414 IPR003609 -
Gso19g1591 494 PIRSF SLG 1 426 IPR035446 -
Gso19g1591 494 PANTHER - 43 472 - -
Gso19g1591 494 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 268 IPR036426 -
Gso19g1591 494 Pfam S-locus glycoprotein domain 241 304 IPR000858 GO:0048544
Gso19g1591 494 PANTHER OS11G0149900 PROTEIN 43 472 - -
Gso19g1591 494 Gene3D - 48 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1591 Gso-Chr19 44826235 44828262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1591 - - gmx:100812159 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1591 19 44826235 44828262 Gso3g1609 3 42023096 42025310 GST