Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1592 ATGGGGGCCTCGCTGTCGAACCTGGGAAGCAACGGTTCGGCCGCCGCTCCGGGCCTCGGCGACATCCCGGAGAATTGCGTCGCTCGCGTCTTTCTCCACCTCACTCCTCCGGAGATTTGCAACCTCGCGCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCCGCGGATTCCGTGTGGCAGACGAAGCTGCCTCGCAACTACCAAGATCTGCTCGATTTAATGCCTCCCGAGAGGCACCGGAATCTCTCCAAGAAGGACATCTTCGCGCTGCTCTCTCGCGCAGTGCCCTTTGATGACGGCAACAAGGAAGTGTGGCTGGATAGGGTTACCGGAAGAGTTTGCATGTCAATTTCGGCGAAGGCGATGTCTATTACTGGAATTGATGACCGCAGATACTGGACTTGGGTTCCTACTGAAGAATCTAGGTTCAACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGTTCAGCTTCCCTTTTCCTGCTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGATTTTCCAAGAGGCTTGGTCGACGTGTCTGCAGTTATGAACATACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTGTCAACCATGGATGGTCAGCAAGCATCATCTGAGTGCTACTTGGATGAAACTGAACCTGATGATTTACACGGCAATCACAAGCGTGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATCGTCAGTGGATCAGAACCTACAACTAAAGTAAGATTCTCCATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCGAGGGATTTGAGAGAGCGCAAGAGAAGTGGCATTCTGAAATAA 888 0.5011 MGASLSNLGSNGSAAAPGLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASADSVWQTKLPRNYQDLLDLMPPERHRNLSKKDIFALLSRAVPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVPTEESRFNTVAYLQQIWWFEVDGEFSFPFPADIYTLSFRLHLGRFSKRLGRRVCSYEHTHGWDIKPVRFELSTMDGQQASSECYLDETEPDDLHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPRDLRERKRSGILK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1592 295 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Gso3g1592 295 Gene3D - 14 110 - -
Gso3g1592 295 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 290 - -
Gso3g1592 295 SMART fbox_2 22 62 IPR001810 GO:0005515
Gso3g1592 295 SUPERFAMILY F-box domain 15 88 IPR036047 GO:0005515
Gso3g1592 295 Pfam Phloem protein 2 113 282 IPR025886 -
Gso3g1592 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1592 Gso-Chr3 41850168 41853933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1592 - - gmx:100807328 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1592 3 41850168 41853933 Gso3g1592 3 41850168 41853933 ECH
Gso3g1592 3 41850168 41853933 Gso10g0560 10 6312952 6317708 PCT
Gso10g0560 10 6312952 6317708 Gso3g1592 3 41850168 41853933 PCT