Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0560 ATGGGCGCGTCGCTGTCGTCGAACGGTTCGAGCATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGTGTGTTCCTCCACCTGACGCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCGTCGGACTCCGTCTGGGAGGCGAAGCTGCCGCGCAACTACCAGGATCTGCTAGATCTCGTGCCGCCGCCGGAGCGCCATCACCGCAGCCTCTCGAAAAAGGACATATTCGCGCTCCTCTCCCGCCCCCTCCCCTTCGACCACGGCCATAAGGAAGTGTGGCTGGACAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGGTGATTACCGGCATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAG 885 0.5175 MGASLSSNGSSIGPGLGDIPESCVACVFLHLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPPERHHRSLSKKDIFALLSRPLPFDHGHKEVWLDRVTGKVCMSISAKAMVITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCNYDHTHGWDIKPVKFEFSTSDGQQASCECCLDETEIDDTYGNHKRGYWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDAVFIVPSDLRERKRRGILK* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0560 294 PANTHER F-BOX PROTEIN PP2-A15 1 292 - -
Gso10g0560 294 Pfam Phloem protein 2 111 281 IPR025886 -
Gso10g0560 294 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Gso10g0560 294 SUPERFAMILY F-box domain 14 76 IPR036047 GO:0005515
Gso10g0560 294 PANTHER F-BOX PROTEIN PP2-A15 1 292 - -
Gso10g0560 294 SMART fbox_2 19 59 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0560 Gso-Chr10 6312952 6317708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0560 - - gmx:100796143 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1592 3 41850168 41853933 Gso10g0560 10 6312952 6317708 PCT
Gso10g0560 10 6312952 6317708 Gso3g1592 3 41850168 41853933 PCT